Serratia ureilytica: J0X03_04310
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Entry
J0X03_04310 CDS
T07185
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
suri
Serratia ureilytica
Pathway
suri03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
suri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
J0X03_04310 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
suri03400
]
J0X03_04310 (recD)
Enzymes [BR:
suri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
J0X03_04310 (recD)
DNA repair and recombination proteins [BR:
suri03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
J0X03_04310 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
UvrD_C_2
Viral_helicase1
NAT10_TcmA_helicase
AAA_11
AAA_22
SH3_13
UvrD-helicase
SLFN-g3_helicase
PhoH
nSTAND3
AAA_28
T2SSE
AAA_16
CbiA
UvrD_C
SRP54
MukB
TrwB_AAD_bind
DUF1995
AAA
NPHP3_N
DO-GTPase1
NTPase_1
DEAD
ATPase
Motif
Other DBs
NCBI-ProteinID:
QSR08219
LinkDB
All DBs
Position
939744..941594
Genome browser
AA seq
616 aa
AA seq
DB search
MIALLEQAVALGALRPLDVQFARVVASEDEPDILLAAACLSAEAGAGHVCLMLEQLQADT
LFEGRQPALALALWEAAGRPDSARWQQRLASSAAVGDGSGATPLVLRGQRLYLQRMWQNE
GEVAAFIGGEGESLTVPEEALRAILDRLFGAASDEPDWQKIAAAVAATRRIAVISGGPGT
GKTTTVAKLLAALVQLDESARLRIQLAAPTGKAAARLTESLGSASRQLALTPAQQALFPT
EAATLHRLLGAQPNSQRMRYHRGNRLHLDVLVVDEASMVDLPMMARLIAALPDRARVIFL
GDRDQLASVEAGAVLGDICRFAEQGYSEARAAELSRLTGCSIEGQRADAQAAVRDSLCLL
RKSYRFDARSGIGQLALAVNAGAGDGALAALNGRFGDVAGYALATSEEYQALLDACVAGY
RDYLRLTAEGADAAAVLAAFSRFQVLCALREGPFGVAGLNERIELGLQRAGLIDRKPGVL
GRWYRGRPVMIGRNDSALGLFNGDIGITLPDERGELRVHFQLPDGSIKSVQPSRLPAHET
AYAMTVHKSQGSEFEHTVLVLPNHFLPVLTRELVYTAITRARQQLSLYATDAVLLRAIRT
PTQRRSGLAERLQTTE
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcactgctggagcaggcggtggcgcttggcgcgctgcgcccgctggacgtgcag
ttcgcccgcgtggtggcgagcgaagacgagcctgatattttactggccgccgcctgtctg
agcgctgaggcgggggcggggcatgtttgcctgatgctggagcagctgcaggcggacacg
ctgtttgaagggcgccaaccggcgctggcgctggcgctgtgggaggcggccgggcgaccg
gatagcgcacgttggcagcagcgcctggcgagcagcgcggcggttggggacggcagcggc
gctacgccgctggtgctgcgtgggcagcgcttatatctgcaacgcatgtggcaaaacgaa
ggtgaagtggcggcgtttatcggcggtgaaggtgaatcgctgacggtgccggaggaggcg
ttgcgcgccattctcgaccgcttgttcggcgcggcgagcgatgaacccgactggcagaag
atcgctgctgcggtggctgccacgcggcgcatcgcggtgatttccggcggaccgggcacc
ggtaaaaccaccaccgtcgctaaactgctggcggcgttggtgcagctggatgaaagcgcg
cgcttgcggattcagctggcggcgccaaccggcaaggcggcggcgcgcctgacggagtcg
cttggcagcgccagccgtcagctggcgttgaccccggcgcagcaggcgttgttccccacg
gaggcggcgacgttacaccgtctgttgggggcgcaacccaacagtcagcgcatgcgctat
caccgcggtaaccgtctgcatttggatgtgttggtggtggatgaggcctcgatggtcgat
ctgccgatgatggcgcgcctgattgcggcgttgcccgatcgggcccgggtgattttcctc
ggcgaccgcgatcagctggcctcggtggaggccggcgcggtgttgggggatatttgccgt
tttgccgagcagggatacagcgaggcgcgcgccgcagagctgagccgcctgaccggttgt
tcgatcgaaggacagcgggccgacgcgcaagcggcggtgcgcgacagcctgtgcctgttg
cgcaagagctatcgcttcgacgcccgttccggcatcggtcaactggcgttggcggtcaac
gccggtgcgggggatggtgcgctggcggcattaaacggccgtttcggcgatgtcgcgggc
tatgcgctggcgacgagcgaagagtatcaggcgctgctggacgcgtgcgtggcgggctat
cgcgactatctgcggctgactgccgaaggcgcggatgcggcggcggtgctggccgccttt
agccgcttccaggtgctgtgcgcgctgcgtgaagggccgttcggcgtcgccggcctgaat
gaacgtattgaactcgggctgcagcgcgccggcctgatcgaccgcaaaccgggtgtgctc
ggccgctggtatcgggggcggccggtgatgatcggccgcaacgacagcgcgctggggtta
ttcaatggggatatcggcattactctgccggatgagcgcggcgagctgcgcgtgcatttc
caactgccggacggcagcatcaagtcggtgcagccgagccgtttgccggcgcatgaaacc
gcttacgccatgacggtgcacaagtcccagggatcggagtttgagcatacggttctggtg
ttgccgaaccatttcctgccggtgctgacgcgtgagctggtctataccgcgatcacccgt
gcgcgtcagcagctctcgctgtacgccacggacgcggtgctgctgcgggccattcgcacg
ccgacccagcgtcgcagcggattggctgaacggctgcagacgacggaataa
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