Serratia ureilytica: J0X03_08475
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Entry
J0X03_08475 CDS
T07185
Symbol
gabD
Name
(GenBank) NADP-dependent succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
suri
Serratia ureilytica
Pathway
suri00250
Alanine, aspartate and glutamate metabolism
suri00310
Lysine degradation
suri00350
Tyrosine metabolism
suri00650
Butanoate metabolism
suri00760
Nicotinate and nicotinamide metabolism
suri01100
Metabolic pathways
suri01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
suri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
J0X03_08475 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
J0X03_08475 (gabD)
00310 Lysine degradation
J0X03_08475 (gabD)
00350 Tyrosine metabolism
J0X03_08475 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
J0X03_08475 (gabD)
Enzymes [BR:
suri01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
J0X03_08475 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
J0X03_08475 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
J0X03_08475 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
QSR08979
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Position
complement(1840810..1842285)
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AA seq
491 aa
AA seq
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MSTSISATLKDPTLFREANYIDGQWLPAKAGHTLAIHNPANGELVGHVPAFGAEETARAI
AAAKKALPAWRALTAKARAGKLRRLFELMMENQEDLARIMTAEQGKPLAESRGEIAYAAS
FIEWFAEEGKRVYGDTIPQPQAGRRIIVQKEPIGVFAAITPWNFPAAMITRKAGPGWAAG
CTGVIRPASQTPFSALAIAVLAERAGLPAGVCNVITGPSKGIGGELTANPDVRKLSFTGS
TEVGAQLLAQCAPTIKKTSMELGGNAPFIVFDDADLDAAVAGAVASKYRNAGQTCVCTNR
FLVQDGVYDAFAAKLKAAVAKLKVGNGLDDGVTIGPLINPDAVEKVREHIADAVEHGASV
LLGGKPDALGGNFFSPTILTDVPRTAKIFREETFGPVAPLIRFSQEADAVELANDTPFGL
AAYFYSRDIGRVMRVAEALEYGIVGINEGLISTEVAPFGGMKHSGLGREGSKYGIEDYLE
IKYLCLGGLDA
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccagcatcagcgctaccctcaaggatcccacgctgttccgcgaggccaattac
atcgacgggcaatggttgccggccaaagcaggccacacgctcgccattcataaccccgcc
aacggcgagctggtcggccatgtgccggccttcggcgccgaagaaaccgcgcgcgccatc
gccgccgccaaaaaggcgctgcccgcctggcgtgcgctgaccgccaaagcgcgcgccggc
aagctgcggcggctgtttgaattgatgatggaaaatcaggaggatctggcgcgcatcatg
acggcggaacagggcaaaccgctggccgaaagccgcggtgaaatcgcctatgccgcctcc
tttatcgaatggttcgccgaggaaggcaagcgggtgtatggcgacaccattccgcagccg
caggccggtcgccgcatcatcgtgcaaaaagagccgatcggcgtgttcgccgccatcact
ccgtggaacttcccggcggcgatgatcacccgcaaagccggccccggctgggcggcgggc
tgcaccggggtgatccgccccgccagccagaccccgttctcggcgctggcgatcgccgta
cttgcggagcgcgccgggctgcccgccggggtatgcaacgtgatcaccggccccagcaaa
ggcatcggcggcgaactcaccgccaatccggacgtacgtaaactctccttcaccggcagc
accgaagtcggcgcgcagctgctggcccagtgtgcgcccaccatcaagaaaaccagcatg
gagctgggcggcaacgcgccgtttatcgtgtttgacgacgccgatctggacgccgccgtg
gccggcgcggtcgcctcgaaataccgcaacgccggccagacctgcgtctgcaccaaccgt
tttctggtgcaagacggcgtatacgatgccttcgccgccaaactgaaagccgccgtcgcc
aagctgaaagtcggtaacggcctggatgacggcgtcaccatcggcccgttgattaacccg
gacgcggtggagaaagtgcgcgagcatatcgccgacgccgtcgagcacggcgcctcggtg
ctgctgggcggcaagcctgacgcgctgggcggcaatttcttcagcccgaccatcctgacc
gacgtgccgcgcacggcgaaaatcttccgcgaggagacgttcggcccggtggcgcccctg
atccgcttcagccaggaagccgacgccgtcgaactggccaacgacacgccgttcggcctg
gccgcttacttctacagccgcgacatcggccgggtgatgcgcgtggccgaagcgctggag
tacggcattgtcggcatcaacgaagggctgatctccaccgaggtggcgccgttcggcggc
atgaagcactccggcttgggccgcgaaggctcgaagtacggcatcgaagactatctcgag
atcaaatacctgtgcctcggcggtttggacgcctga
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