Serratia ureilytica: J0X03_10770
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Entry
J0X03_10770 CDS
T07185
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
suri
Serratia ureilytica
Brite
KEGG Orthology (KO) [BR:
suri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
suri03016
]
J0X03_10770
Enzymes [BR:
suri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
J0X03_10770
Transfer RNA biogenesis [BR:
suri03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
J0X03_10770
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
PilZ
Motif
Other DBs
NCBI-ProteinID:
QSR09404
LinkDB
All DBs
Position
complement(2314645..2316579)
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AA seq
644 aa
AA seq
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MFQDNPLLAQLKQQLHSQTPRVEGVVKGTEKGFGFLEVDGQKSYFIPPPYMKKVMHGDRI
IATLHTEKEREIAEPETLVEPFLSRFVGRVQKRDDRLSIVPDHPLLKDAIPCRPVRELIH
NFQAGDWAVAEMRRHPLKGDRGFNADLTQFITDGEDHFAPWWVTLARHNLEKEAPEMQAL
SEPDAALVREDLTALEFVTIDSASTEDMDDALYVTDNGDGSLQLTIAIADPTAYVEQGSK
LDDIARVRAFTNYLPGFNIPMLPRDLSDNLCSLRPNERRQVLACRVTIAADGALGEDIQF
FAAEIESKAKLVYDEVSDWLDGITGWQPPSDAIAQQITLLKRVCDARNAWRHQHALVFKD
RPDYRFVLGEKGDVLEIVTEQRRSANRIVEECMIAANVCAAIVLRDRLGFGVYNVHTGFD
PALVEQAVTVLQANGVEAEAEKLLTLDGFCELRRHLDAQPTQFLDSRIRRFQTFAEISTT
PGPHFGLGLEAYATWTSPIRKYGDMVNHRLLKAIINQQPAEKPQDDVTVQLAERRRLNRM
AERDVGDWLYARFLQDKAGTDTRFNAEIIDVTRGGLRVRLLDNGAVAFIPAPFIHAVRDE
MQCSQETGTVQIKGEVVYRQSDTLQVTIAEVRMETRSVIARPAA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagataacccgctgctggcgcagctaaaacagcaacttcactctcagaccccg
cgcgttgaaggcgtagtgaaagggactgagaaaggctttggctttcttgaagtagacggt
caaaaaagctacttcattccgccgccgtacatgaagaaagtcatgcacggggatcgcatt
atcgccaccctgcacaccgagaaagagcgcgaaatcgccgagccggaaaccttggtcgag
ccattcctgtcgcgctttgtcggccgcgtgcaaaagcgcgacgatcgtctgtccatcgtg
cccgatcatccgttgctgaaagacgcgattccgtgccgcccggtgcgtgaactgatccac
aacttccaggccggcgactgggcggtggcggaaatgcgccgccatccgctgaaaggcgat
cgcggcttcaacgccgacctgacccagtttatcaccgacggtgaagaccatttcgccccg
tggtgggtgacgctggcgcgtcacaacctggaaaaagaggcgccggagatgcaggccctc
agcgagccggacgctgcgctggtgcgtgaagatctgaccgcgctcgaattcgtcaccatc
gacagcgccagcaccgaagacatggacgatgcgctgtacgtgaccgacaacggtgacggt
tcgctgcagttgaccatcgccatcgccgatcctactgcctacgtagaacaaggcagcaag
ctggacgatatcgcccgcgtgcgcgccttcaccaactatctgccgggcttcaacatcccg
atgctgccgcgcgatctgtcggacaacctgtgctcgctgcgccctaacgagcgccgtcag
gtgctggcttgccgcgtgaccatcgccgccgacggcgcgctgggcgaagatattcagttc
ttcgccgccgagatcgaatccaaagccaaactggtgtacgacgaagtctccgactggctg
gacggcattaccggctggcaaccgccgagcgacgccatcgcgcaacagatcaccctgctg
aaacgcgtttgcgacgcgcgcaacgcctggcgccaccagcatgcgctggtattcaaagat
cgcccggactaccgcttcgtgttgggtgaaaaaggcgatgtgctggagatcgttaccgag
cagcgccgcagcgccaaccgcatcgttgaagagtgcatgatcgccgccaacgtctgcgcc
gccatcgtgctgcgcgatcgcctgggcttcggcgtgtacaacgtgcacaccggtttcgat
cctgcgctggttgagcaagcggtcaccgtactgcaggccaacggcgtcgaagccgaagcc
gagaagctgctgaccctcgacggtttctgcgaactgcgccgccacctggatgcgcagccg
acccagttcctcgacagccgcatccgccgcttccagaccttcgccgagatcagcactacg
ccggggccacacttcggtctggggctggaggcttacgccacctggacatcaccgatccgt
aaatacggcgatatggtcaatcatcgcctgctgaaggcgatcatcaaccagcagccggcg
gaaaaaccgcaggatgacgtgacggtgcagctggcggaacgccgccgcctgaaccgcatg
gcggaacgcgacgtcggcgactggctgtacgcccgcttcctgcaggacaaggccggtacc
gatacccgcttcaacgccgagatcatcgacgtgacacgcggcggcctgcgcgtgcgcctg
ctggacaacggcgcggttgccttcatcccggcgccgtttattcacgcggtgcgtgacgag
atgcagtgcagccaggaaaccggcaccgtgcagatcaaaggcgaagtagtttatcgccaa
agcgataccttgcaggtcaccatcgccgaagtgcgcatggaaacccgcagcgtgatcgcc
cggccggcggcctga
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