Serratia ureilytica: J0X03_10790
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Entry
J0X03_10790 CDS
T07185
Symbol
dacD
Name
(GenBank) serine-type D-Ala-D-Ala carboxypeptidase DacD
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
suri
Serratia ureilytica
Pathway
suri00550
Peptidoglycan biosynthesis
suri01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
suri00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
J0X03_10790 (dacD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
suri01002
]
J0X03_10790 (dacD)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
suri01011
]
J0X03_10790 (dacD)
Enzymes [BR:
suri01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
J0X03_10790 (dacD)
Peptidases and inhibitors [BR:
suri01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
J0X03_10790 (dacD)
Peptidoglycan biosynthesis and degradation proteins [BR:
suri01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
J0X03_10790 (dacD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Beta-lactamase
tRNA-synt_1_2
Motif
Other DBs
NCBI-ProteinID:
QSR09408
LinkDB
All DBs
Position
2320852..2322021
Genome browser
AA seq
389 aa
AA seq
DB search
MKRSVSVVIGGILLPLAAQAAETASHFSTMTPPAIDAASYVLMDYTTGQVLAAGNADERR
NPASLTKLMTGLVIDHALDEHKIGLDDVVTVGKDAWAQGNPVFKGSSLMFLKPGDRVTVR
DLSRGIIIDSGNDACVAMADYVAGSQANFVKLMNEKSAQLGLQNTHFETVHGLDAPGQFT
TAGDLAVIARAIIMSEPAEYHMYSEKSLTWNGITQQNRNGLLWDKTLHVDGLKTGHTASA
GFNIIASATEGDRRLIAVVMGGKSSKGREEQARKLLSWGLRDFSTVHLFSAGQSLGEEPI
WYGESHRLPVGSAQDQSLSLPKNEADKLKAQYVLNVARLEAPINKGQIVGEIRISDNGQV
VKTLPLVALRAVPQGGVFSRLADYVKLKL
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcgttcagtatcagtggtgatcggcggtatcttactgcctttagcggcgcaggcg
gcggaaacggcgtcccatttttccaccatgaccccaccggcgatagacgccgcctcttac
gtattgatggattacaccaccggccaggtgctggcggccggcaatgccgacgagcggcgc
aatccggccagcctgaccaaactgatgaccggtttggtgatcgaccatgcgctcgatgag
cataagattggcctcgacgatgtcgtcaccgtggggaaagacgcctgggcgcagggcaac
ccggtgttcaaaggctcctcgctgatgttcctgaaacctggtgacagggtcacggtacgc
gatctcagccgcggcatcatcatcgattccggcaacgacgcctgcgtggcgatggcggac
tatgtggcgggcagccaggccaacttcgtcaagctgatgaacgagaagagcgcgcagctg
ggattgcagaacacgcattttgaaacggtgcacgggctggatgcgccgggccagttcacc
accgccggcgatctggcggtgattgcgcgcgccatcatcatgagcgagccggcggaatac
catatgtacagcgagaaatcgctgacctggaacggcatcacgcagcagaaccgcaacggc
ctgctgtgggacaagaccctgcacgtcgacggactgaaaaccggacacaccgcctcggcc
ggcttcaacatcatcgcttccgccaccgaaggagatcgccgtctgatcgccgtggtgatg
ggcggcaaaagttcaaaaggccgcgaggaacaggcgcgcaagctgctgagctgggggctg
cgcgactttagcacggtacacctgttcagcgccggccagagcctgggggaagagccgatc
tggtatggtgaaagccaccgcttgccggtcggcagcgcgcaggaccagtcgctcagcctg
ccgaaaaacgaggcggacaagctgaaggcgcagtacgtgctcaacgttgcgcggctggaa
gcgccgatcaacaaaggacaaatcgtcggcgagatccgcatcagcgacaatggtcaggtg
gtgaaaaccctgccactggtggcgctgcgggcggtgccgcagggcggggtgttctcccgc
ttggcggattacgtgaagctcaaactctga
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