Serratia ureilytica: J0X03_12420
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Entry
J0X03_12420 CDS
T07185
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
suri
Serratia ureilytica
Pathway
suri02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
suri00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
J0X03_12420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
suri03021
]
J0X03_12420
Transcription machinery [BR:
suri03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
J0X03_12420
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
PhyR_sigma-like
HTH_23
HTH_7
HTH_Tnp_4
HTH_24
TnsD
HTH_31
HTH_28
HTH_IclR
HTH_36
HTH_38
DUF722
HTH_11
Rv2175c_wHTH
DUF1118
DUF3080
HAC6_helical
Phage_terminase
Motif
Other DBs
NCBI-ProteinID:
QSR05284
LinkDB
All DBs
Position
2681656..2682180
Genome browser
AA seq
174 aa
AA seq
DB search
MSATASAPHAALSRLYATHHAWLQGWLRRRLGCAFDADDVAQDTFMRLLKSDAAATLREP
KDFLVTVAKRVMVDLFRRRTLERAYLEMLALIPEGYAPSPEQRQSLLESLQQIDAMLDGL
GPKVKQAFLLSQLEGLGYADIAARLGVSVSSVKKYMAKATEHCLLFSLENDVYS
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccaccgcctctgccccgcacgccgcgctgtcgcgcctttacgccacccaccac
gcctggttgcagggatggttgcgtcggcggctgggctgcgctttcgacgcggacgatgtg
gcgcaggacacctttatgcgcctgctgaaaagcgacgccgcggcgaccctgcgcgagccg
aaagattttctggtcaccgtcgccaagcgggtgatggtcgatctgttccgccgcagaacg
ctggagcgcgcctatcttgagatgctggcgctgatcccggaaggctacgccccgtcgccg
gagcagcgccagagcctgctggaaagcctgcagcagatcgacgccatgctcgacggcctg
gggccgaaggtaaaacaggcctttctgttgtcgcagctcgaaggcctgggctatgcggac
atcgccgcgcgcctcggcgtgtcggtcagttcggttaaaaaatacatggccaaagccacc
gagcattgcctgctgttcagcctcgaaaacgacgtttattcatga
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