Serratia ureilytica: J0X03_15155
Help
Entry
J0X03_15155 CDS
T07185
Symbol
ldtD
Name
(GenBank) L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
suri
Serratia ureilytica
Brite
KEGG Orthology (KO) [BR:
suri00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
suri01002
]
J0X03_15155 (ldtD)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
suri01011
]
J0X03_15155 (ldtD)
Peptidases and inhibitors [BR:
suri01002
]
Cysteine peptidases
Family C82
J0X03_15155 (ldtD)
Peptidoglycan biosynthesis and degradation proteins [BR:
suri01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
J0X03_15155 (ldtD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
QSR05782
LinkDB
All DBs
Position
complement(3220071..3221879)
Genome browser
AA seq
602 aa
AA seq
DB search
MLLKKGNSLRRLALSGAIACSLVSSFSALATVTALPVASAGMSVAQSRSELLAALPRGMD
LHYLSTLAPLYAANHMQPMWQDREAVQQFQQQLAELAMSGVQPQFTQWVKMLTNPALNDV
GRDVVLSDAMLGYLQFVSAIGANGTSWLYSNIPYKLGLPPTAVINQWQLAVRQARTLSYV
NSLAPQHPQYAKMHQALRDMLADNRPWPQVGSGPSLRPGQMSNDIPALREILTRTGMLAA
SAPEAEPEPAVVSAKSNEPDDGGLTVDEEKGRVTVSPSAAPVTELTAEQTPPQVGSVVSD
NLYTNELVEGVKRFQKWQGLTADGVIGVRTREWLNVSPKTRAALLALNIQRLRILPGHVG
TGIMVNIPNYSLTYYQNGNEVLSSRVIVGRPSRKTPLMSSALNNVVVNPPWNVPTTLVRE
DIVPKAMRDGNYFQKHGYTVLSGWSNDAEVINPAMIDWSMVSARNFPYRVRQAPGATNSL
GRFKFNMPSSDAIYLHDTPNHSLFQKDIRALSSGCVRVNKASDLANMLLQDAGWNNSRVS
STLKEGNTTYVNIRQRIPVKLYYLTAWVSDDGQPQFRTDIYNYDNTVRSGAQILAQAKKL
MQ
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgttgcttaaaaagggaaactctctacgacgtttggcgctgagtggcgctatcgcctgt
agtcttgtgtcgtcgttttccgcattggccaccgtaacggcgttaccggtggcatcagca
ggcatgtccgttgcgcagagccgttctgaactgctggccgcgttgccgcgcggcatggat
ctgcactacctttccacgctggcgccgctgtatgcggcgaatcatatgcagccgatgtgg
caggatcgcgaggccgttcagcagtttcaacagcagctggccgagctggcgatgtccggc
gtgcagccgcagttcacccaatgggtgaagatgttgaccaatccggcgctcaatgacgta
ggccgcgatgtggtgctgtccgatgcgatgctgggctatttgcagttcgtgtccgctatc
ggcgccaacggcaccagttggctgtacagcaatattccctacaagcttggcttgccgccc
actgcggtgatcaaccaatggcagctggcggtgcgtcaggcgcgcacgctgagctatgtg
aattcgctcgcgccgcagcacccgcaatacgccaagatgcatcaggcgctgcgcgatatg
ttggcggataaccgcccctggccacaggtgggcagcggcccgagcctgcgcccaggacaa
atgagcaacgatattcctgcgctgcgtgaaatcctgacgcgcaccggcatgctggccgct
tcggcgccggaggccgagccggagccggcggtcgtctcggcgaagagcaatgagcctgat
gacggcgggctgacggtagacgaagagaaggggcgtgtgacggtcagtccgtcggcggcg
ccggtgacggagttgaccgctgaacagacgccgccgcaggtcggcagcgtggtgagcgac
aacctctataccaacgagctggtggagggcgtcaaacgtttccagaaatggcaggggctg
acggcggacggcgtgatcggcgtgcgcactcgcgagtggctcaacgtgtcaccgaaaacc
cgcgccgcgctgctggcgttgaatatccaacgtctgcgaattttaccggggcatgtcggc
accggcattatggtgaatattcccaactactcgctgacctactaccagaacggcaacgaa
gtgctgtcctcccgcgttatcgtcgggcggccgagccgcaagacaccgctgatgagcagc
gcgttgaacaacgtggtggtcaacccgccttggaacgtaccgactacgctggtgcgtgag
gatatcgtgccgaaggcgatgcgcgacggtaactatttccagaaacacggctataccgtg
ctgtcgggctggagcaacgatgcggaggtgatcaacccggcgatgatcgactggagcatg
gtctctgcgcgcaacttcccgtatcgcgtgcgccaggcgccgggtgccaccaactcgctg
gggcgtttcaagttcaatatgccgagttcggacgcgatctacctgcacgataccccgaac
cacagcctgttccagaaagacattcgcgcgctcagctccggctgcgtgcgggtgaacaag
gcttccgatttggcgaatatgctgctgcaggatgccggctggaacaatagccgcgtttcc
tccacgctgaaagaagggaataccacttatgtgaatattcgccagcgtattcccgtaaaa
ctgtattatctgaccgcctgggtttcggatgacggccaaccgcaattccgtacagatatt
tacaattatgataatacggtgagatcgggtgcacaaattttggctcaggccaaaaaatta
atgcagtaa
DBGET
integrated database retrieval system
