Serratia ureilytica: J0X03_16890
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Entry
J0X03_16890 CDS
T07185
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
suri
Serratia ureilytica
Pathway
suri00300
Lysine biosynthesis
suri00470
D-Amino acid metabolism
suri01100
Metabolic pathways
suri01110
Biosynthesis of secondary metabolites
suri01120
Microbial metabolism in diverse environments
suri01230
Biosynthesis of amino acids
Module
suri_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
suri00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
J0X03_16890 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
J0X03_16890 (dapF)
Enzymes [BR:
suri01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
J0X03_16890 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
QSR06105
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Position
3594208..3595083
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AA seq
291 aa
AA seq
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MTPLLFHKYHGLGNDYLVCHRSVADRLSQEQIRLLCHPHYGIGSDGLLIDSGDAVNPTLR
IINPDGSEAEKSGNGLRIYARYLFDSKRVAHQPFLVHTAGGDVRCQVAEDAHQITVEMGR
ANFSPAALPALIDLPEALNYPLPLKEETLSVSLVSMGNPHCVVPVEKLDLAQVHRLGPQI
ERHPLLPKRTNVQLVEVVDRQTLRIGIWERGAGFTLASGSSSCAAASVMRKLGRVGDRVS
VRMPGGELQIAFSGDFQVSMRGPVHKIATLTLDEDCFAGGAGLFTGSTPAA
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgactcccctgctgtttcacaaatatcacggtctgggcaacgactacctggtatgccac
cgttcggtcgccgatcgcctgagccaggaacaaatccgcctgctgtgccacccgcattac
ggcatcggttccgacggcctgctgatcgacagcggcgacgccgtcaatcccaccctgcgc
atcatcaacccggacggctccgaagcggagaaaagcggcaacggcttgcgtatctatgcg
cggtatctgttcgacagcaagcgcgtggcgcatcagccgtttctggtgcacaccgccggc
ggcgacgtgcgttgccaggtggcggaagacgcgcatcagataaccgtggagatggggcgc
gccaatttcagcccggcggcgctgccggccttgatcgatctgccggaggcgctgaactat
ccgctgcccctgaaggaggagacgttaagcgtttcgctggtgtcgatgggcaacccgcac
tgcgtggtgccggtggaaaaactggatctggcgcaggtgcatcggctcggaccgcagatt
gagcgccatccgctgctcccgaaacgcaccaatgtacaactggtggaagtggtcgatcgc
cagacgctgcgcatcggcatctgggagcgcggcgccggctttaccctcgcctccggcagc
agcagctgcgccgccgccagcgtgatgcgcaagttgggacgagtcggcgatcgggttagt
gtgcggatgccaggcggcgaactgcagatcgccttcagcggcgattttcaggtcagcatg
cgcggaccggtgcataaaatcgccaccctgacgctggacgaagactgctttgccggcggc
gcggggctgtttacgggatccaccccagcagcctga
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