Serratia ureilytica: J0X03_17290
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Entry
J0X03_17290 CDS
T07185
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
suri
Serratia ureilytica
Pathway
suri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
suri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J0X03_17290 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
suri03019
]
J0X03_17290 (rhlE)
Enzymes [BR:
suri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
J0X03_17290 (rhlE)
Messenger RNA biogenesis [BR:
suri03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
J0X03_17290 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
AAA_22
UvrD-helicase
Cas3-like_C_2
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
QSR06178
LinkDB
All DBs
Position
complement(3672187..3673566)
Genome browser
AA seq
459 aa
AA seq
DB search
MSFETLGLSAEIVRAVEEQGYREPTPIQRQAIPVVLEGRDLMASAQTGTGKTAGFTLPLL
QLLSKHDHPVKGRRPVRALILTPTRELAAQIGENVDAYSKHLRLRSLVVFGGVSINPQMM
KLRGGVDILVATPGRLLDLEHQNAVDLSKIEILVLDEADRMLDMGFIHDIRRVLAKLPAK
RQNLLFSATFSDDIKALANKLLHNPASVEVARRNTASEQIEQSVHFVDKKRKRELLSQMI
GEGDWKQVLVFTRTKHGANHLAEQLNKDGITAAAIHGNKSQGARTRALADFKDGRIRVLV
ATDIAARGLDIDQLPHVVNYELPNVPEDYVHRIGRTGRAERTGEAISLVCVDEHKLLRDI
ERLLKREIPRIALPGYEPDPTIKAEPIINGRQGGGRGAPRGNGGGQRSGNGGGQRSGNAN
GGQRENRGNGNGNARPQGDGQRRSGAPASRRPRNRKPAE
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttgaaaccctcggcttaagtgctgaaattgtgcgcgctgttgaagaacagggc
tatcgcgaaccgacgccaattcagcgtcaggctatccctgtcgtgctggaaggtcgtgac
ctgatggccagcgcccagaccggcaccggtaaaaccgccggttttaccctgccgctgttg
cagctgctgagcaagcatgaccatccggtcaaaggccgtcgcccggtgcgcgcgctgatc
ctgacgccaacccgtgagctggcggcgcagatcggcgaaaacgtcgatgcctacagcaaa
cacctgcgcctgcgttcgctggtggtgtttggcggcgtgagcatcaacccgcagatgatg
aagctgcgcggcggcgtcgatatcctggtggcgacgccggggcgtctgctggatctggaa
catcagaacgcggttgacctgtccaaaatcgaaattctggtgctggacgaagcggaccgc
atgttggacatgggctttatccatgacatccgtcgcgtgctggccaagctgccggccaag
cgccagaacctgctgttctccgccaccttctccgacgacatcaaggcgctggccaacaaa
ctgctgcataacccggcctcggtggaagtggctcgccgcaataccgcgtccgagcagatc
gagcagagcgtgcacttcgtcgacaagaagcgtaagcgggaactgctgtcgcagatgatc
ggcgaaggcgactggaaacaggtgctggtctttacccgcaccaagcacggtgccaaccac
ctggcggaacagctgaacaaagacggcatcaccgctgcggcgatccacggcaacaagagc
cagggcgcccgtacccgtgcgctggccgattttaaagacggccgcatccgcgtgctggtg
gcgaccgacattgcggcgcgcggtctggatatcgaccagttgccgcacgtggtgaactac
gagctgcctaacgtgccggaagactacgtgcaccgcatcggccgcaccggccgcgcggag
cgtaccggcgaagccatctcgctggtgtgcgtggatgaacacaagctgctgcgcgacatc
gagcgtctgctgaagcgtgaaattccgcgcattgcgttgccgggctacgagccggatccg
accatcaaggccgagccgatcatcaacggccgccagggtggcggacgcggcgcgccgcgc
ggcaacggcggtggccagcgttccggtaacggcggcggtcagcgcagcggtaacgccaac
ggcggccagcgtgaaaaccgtggcaacggtaacggcaacgctcgcccgcagggtgacggc
cagcgccgttccggcgcgccggcctcgcgtcgcccgcgcaaccgcaaaccggccgaataa
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