Serratia ureilytica: J0X03_18960
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Entry
J0X03_18960 CDS
T07185
Symbol
sbcC
Name
(GenBank) exonuclease subunit SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
suri
Serratia ureilytica
Brite
KEGG Orthology (KO) [BR:
suri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
suri03400
]
J0X03_18960 (sbcC)
DNA repair and recombination proteins [BR:
suri03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
J0X03_18960 (sbcC)
Archaeal homologous recombinant proteins
J0X03_18960 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
nSTAND3
AAA_21
cobW
AAA_15
NTPase_1
TsaE
AAA_22
GTP_EFTU
Motif
Other DBs
NCBI-ProteinID:
QSR06484
LinkDB
All DBs
Position
4014394..4017645
Genome browser
AA seq
1083 aa
AA seq
DB search
MKILSLRLKNLNSLQGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHQTPR
LNVTPSQNELMTRHTAESLAEVEFEVKGVGYRAFWSQRRAKNAPDGNLQAPKVELARRED
GKILADKVRDKLEITAAITGLDFGRFTKSMMLSQGQFAAFLNADANDRAELLEELTGTEI
YGRLSEQVFESHKLAKTDLDGLHQRASGIELLNDEQRHSLSEQLTALSAQEITLGEQTQQ
QQQALSWLQQWQRLRQQQSEGQLRLETAQREQAEAAPQLQRLALSEPAEKLRPLRGERDR
CRAELQTIQQQAAQLTQQQEQHSAQLAPLQQAVEKTRQAQQTHAEHMRQQQQLIDEQVAP
LDHQIAQLLSTQAERRQAGDAAAQQCAKQQTALEQLTVQRHQLTTQAAQHQQQLSALSEA
LAVQQQQQQALEAKTPLAPLRQRLSALADLRPTRQQLFTLTSLHRQTRERLARQQAEHAE
RQTQLAGLQQQLENARQQFKQHKAQLQEVERIYELEKRIVSLEAERALLQNGAPCPLCGS
TSHPAVEQYQAVQPSATEQRLVEMRTLAEKLQTQGTELRTRCEGLQEQQQRQQQTIAQDE
QQLAAQQQQWRQLSAPLAFDFTLADGEQLSAWLNGCDDEERCGQQALQQHEQAAQAVQQA
KDALTALQAQQQQTQQQLALLEERFTLLHKAHADSLQQQQELQQRWQEGEKTLAERRAQR
LALFGEQQVAQVREQLRAKQTACEQASVQAAEQWQKAQELRERLAGQQAGLQQQHTQMQE
RLQQAQQQWQQALADSEFADETAFAAALLDDALRRELQQRKEQLQQRQVEAAALLTQATQ
TLEQHRLNRPEGVDEANADLDALTQSLAALAQQLKALQLSQGELRNQLESDAARRLNQQA
LFEQIARSQQDYDDWSYLNQLIGSKEGDKFRRFAQGLTLDHLVYLANLQLGRLHGRYLLQ
RKTSDALELQVVDTWQADALRDTRTLSGGESFLVSLALALALSDLVSHKTSIDSLFLDEG
FGTLDAETLDTALDALDSLNASGKTIGVISHVEAMKERIPVQIKVKKVNGLGVSRLEAHF
RLE
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcctcagcctgcggttaaaaaacctcaattcgctgcagggcgaatggaaaatt
gacttcaccgccgagccgttcgccagcaacggcctgttcgccattaccggcccgaccggc
gcaggcaaaaccaccctgctggacgccatctgcctggcgctgtaccaccagacgccgcgc
ctcaacgtcacgccgagccagaatgaactgatgacccgccacaccgccgaatcgctggcg
gaggtcgaattcgaggtcaagggcgtcggctatcgcgccttctggagccagcgccgcgcc
aaaaatgcgccggacggcaatttgcaggcgccgaaggtcgaactggcgcgccgcgaggac
ggcaagatcctggcggataaggtgcgcgacaagctggagatcaccgctgccatcaccggg
ctggacttcggccgcttcaccaaatcgatgatgctgtctcaggggcagttcgccgcgttc
ctcaacgccgacgccaacgatcgcgccgagctgttggaagagctgaccggcaccgaaatc
tacgggcggctgtccgaacaggtgttcgagtcgcacaagctggccaaaaccgacctggat
gggttgcaccagcgcgccagcggcatcgagctgctgaacgacgagcagcgccactccttg
agcgaacagctgacggcgctgagcgcgcaggaaatcaccctcggcgagcaaacccagcaa
cagcaacaggcgctgagctggctgcagcaatggcaacgcctccggcaacagcaaagcgag
ggtcagctgcggctggaaaccgcccagcgcgagcaggccgaggccgccccgcagctgcag
cggctggcgctcagcgaaccggccgagaaattgcggccgctgcgcggcgaacgcgatcgc
tgccgcgccgagctgcaaacgatacaacagcaggcagctcagctgacgcagcaacaggaa
caacactcggctcagttggcgccgctgcagcaggcggtggagaaaacccgccaggcgcag
caaacccatgccgagcatatgcggcaacagcaacagctgatcgacgagcaggtcgccccg
ctcgatcaccaaatagcccaactgctatcgacccaggccgagcggcgacaggccggcgat
gccgccgcgcagcagtgcgctaaacaacagaccgcgctggagcaactcaccgtccaacgc
caccaactgacgacgcaggccgcacagcatcagcagcaactgagcgcgctgagcgaagcg
ctggccgttcaacagcaacagcagcaggcactggaggcgaaaacgccgctggccccgctg
cgccagcgcctgagcgccctggcagacctgcgcccaacgcgccagcagctgtttactctg
acatcccttcaccgtcagactcgcgagcgtctggcccggcaacaggcggagcatgccgag
cggcaaacgcagctcgccgggttgcaacaacagctggagaacgcgcgtcagcaattcaaa
cagcacaaggcgcagctgcaggaagtggagcggatctacgaactggaaaaacgcatcgtc
agtctggaggcggagcgcgccctgctgcagaacggtgccccctgcccgctgtgcggttcc
accagccatccggcggtagagcagtatcaggcggtgcagccttcggccacggaacagcgt
ttggtcgagatgcgtaccctcgccgagaaactgcaaacccagggcaccgagctgcgtacc
cgctgcgaaggcctgcaggaacaacaacagcgccaacagcaaaccatcgcgcaggatgaa
cagcagctggctgcccaacagcagcagtggcggcagctcagcgcaccgctggcgttcgac
tttacgttggcggatggcgagcaactcagcgcctggctgaacggctgcgacgacgaagag
cggtgcgggcaacaggcgctgcagcagcatgaacaggcggcgcaggcggtacagcaggcg
aaagacgcgctcaccgctctgcaagcgcagcagcagcagacgcagcaacagctggcgttg
ctcgaagaacgctttacgctgctgcataaagcccacgccgacagcctgcaacagcagcaa
gagctgcaacaacgctggcaagaaggcgagaaaaccctcgctgaacgacgtgcgcagcgg
ctggcgctgttcggcgaacagcaggtggctcaggtgcgcgaacagctgcgcgccaaacaa
accgcctgcgaacaggccagcgttcaggccgccgagcagtggcaaaaggcgcaggaactg
cgcgaacgcctggccggccagcaggccgggttacaacaacagcacacccaaatgcaggaa
cggctgcagcaggcgcagcagcaatggcagcaggcgctggccgacagcgaattcgccgat
gaaaccgccttcgccgccgcgctgctggacgacgccctgcgccgcgaattgcagcagcgc
aaagagcaactgcaacagcggcaggtagaggctgcggccctgctgactcaggcgacgcaa
acgctggagcagcatcggctgaaccgccctgaaggggtggatgaagccaacgcggatctc
gacgcgctcacccaatcgctggccgcgctggcacagcagttgaaggcgctgcagctgagc
cagggcgaactgcgcaaccagctggaaagcgacgccgcccgtcgtctcaatcaacaggcg
ctgttcgagcaaatcgcccgcagccagcaagactacgacgactggagctacctcaaccag
ctgatcggctcgaaagaaggcgacaagttccgccgtttcgctcaggggctgacgctcgat
cacctagtctacctggccaaccttcagctcggccggctgcacgggcgctacctgctgcag
cgcaaaaccagcgacgcgctggagctgcaggtggtggacacctggcaggccgatgcgctg
cgcgatacccgcaccctgtccggcggcgagagcttcctggtcagcctggcgctggcgctg
gcgttgtccgatctggttagccacaaaaccagcatcgactcgctgttcctcgacgaaggc
ttcggcacgctggacgccgaaaccctcgataccgcgctggacgcgctggacagcctgaat
gcttccggtaaaaccattggcgtgatcagccacgtcgaggcgatgaaagagcgtattccg
gtgcaaatcaaggtgaaaaaggtcaacgggcttggcgtcagccggctggaggcgcacttc
aggctggaatga
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