Serratia ureilytica: J0X03_20075
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Entry
J0X03_20075 CDS
T07185
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
suri
Serratia ureilytica
Brite
KEGG Orthology (KO) [BR:
suri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
suri03016
]
J0X03_20075 (truD)
Enzymes [BR:
suri01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
J0X03_20075 (truD)
Transfer RNA biogenesis [BR:
suri03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
J0X03_20075 (truD)
Prokaryotic type
J0X03_20075 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QSR06682
LinkDB
All DBs
Position
complement(4228731..4229777)
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AA seq
348 aa
AA seq
DB search
MDMANLTWLHGQPQSTGVLKANPEDFVVVEDLGFAPDGEGEHVLVNIRKNGCNTQFVADY
LARFAGIHARSVSYAGLKDRHAVTEQWFCLHMPGKDTPDFSQFALEGCEVLSFARHLRKM
RIGNLKGNHFTLVLRQISDRQDVERRLQAIAAQGVPNYFGSQRFGRGGNNLVMARRWAND
EIRVKERSKRSFYLSASRSALFNLIAGRRLADGLQRTVLEGDALQLSGRGSWFVAKADEL
ETLQQRLDAGELAITASLPGDGEPGTAGQALAFEQQCLAEQPELLTLLKRERVEPARRAL
LLQPQNLQWNWWDDVTVELRFWLPAGSFATSVVREIMQQDNSDADIAE
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggatatggcgaatctgacctggctgcatggccagccgcagagcaccggggtgttgaaa
gccaatccggaagacttcgtggtggtggaagacctgggctttgcgccggacggcgaaggc
gagcatgtgctggtgaacatccgtaaaaacggctgcaatacccagttcgtggccgactat
ctggcgcgcttcgccggtattcacgcccgttccgtcagctatgcgggcttgaaggatcgc
cacgcggtgaccgaacagtggttctgcctgcatatgccgggcaaagacacgccggatttc
tcacagtttgcgctggaaggctgcgaggtgctctcgttcgcccgccacctgcgcaaaatg
cgcatcggcaatctgaagggcaaccactttacgctggtgctgcgccagatttccgatcgt
caggacgttgagcgccgcctgcaggctatcgccgcgcagggcgtgccaaactatttcggc
agccaacgcttcggccgcggcggcaacaatctggtgatggcgcgccgctgggcgaacgac
gaaatccgcgttaaagagcgcagcaagcgcagcttctacctttccgccagccgcagtgcg
ctgttcaatctgatagccggccggcgcctggccgacggcctgcagcgcaccgtgctggaa
ggggatgccctgcagttgagcggccgcggtagctggttcgtcgccaaagccgatgagctg
gagacgttgcaacagcggctggatgccggcgagctggcgatcacggcctccttgccgggc
gacggagagccaggcaccgccggccaagccttggcttttgaacaacaatgcttggcggaa
caaccggaattgcttacgcttttaaagcgcgagcgtgtcgaacccgctcgccgggccctg
ctgttgcagccgcaaaatttgcagtggaactggtgggatgacgttaccgtggaactgcgc
ttctggttgccggcaggcagctttgctaccagcgtggttcgcgaaatcatgcagcaggat
aacagtgatgcggatattgctgagtaa
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