Serratia ureilytica: J0X03_20625
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Entry
J0X03_20625 CDS
T07185
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
suri
Serratia ureilytica
Pathway
suri00220
Arginine biosynthesis
suri00240
Pyrimidine metabolism
suri00250
Alanine, aspartate and glutamate metabolism
suri01100
Metabolic pathways
suri01110
Biosynthesis of secondary metabolites
suri01240
Biosynthesis of cofactors
Module
suri_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
suri00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
J0X03_20625 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
J0X03_20625 (carB)
00220 Arginine biosynthesis
J0X03_20625 (carB)
Enzymes [BR:
suri01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
J0X03_20625 (carB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
ATP-grasp_3
Dala_Dala_lig_C
ATP-grasp_4
ATPgrasp_Ter
CoA_binding_2
BamE
Motif
Other DBs
NCBI-ProteinID:
QSR06789
LinkDB
All DBs
Position
complement(4354824..4358048)
Genome browser
AA seq
1074 aa
AA seq
DB search
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM
ADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLAEFGVTMIGATA
DAIDKAEDRRRFDVAMKKIGLDTARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGTGGG
IAYNREEFEEICERGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAM
GIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFSVNPKTGRLIVIEM
NPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIP
RFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEA
LTKIRRELKDAGSDRIWYIADAFRAGLSVDGVFNLTNVDRWFLVQIEELVRLEEQVAEAG
INGLDKDFLRTLKRKGFADARLAKLAGVAESEIRKLRHSHGLHPVYKRVDTCAAEFATDT
AYMYSTYEEECESNPTNDRPKVMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVN
CNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARELEAAGVP
IIGTSPDAIDRAEDRERFQQAVNRLGLKQPANATVTAIEQAVEKAAGIGYPLVVRPSYVL
GGRAMEIVYDETDLRRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAICDGERVLIGGIME
HIEQAGVHSGDSACSLPAYTLSQEIQDVMRRQVEKLAFELQVRGLMNVQFAVKDNEVYLI
EVNPRAARTVPFVSKATGVPLAKVAARVMAGKTLVEQGVTEEIIPPYYSVKEVVLPFNKF
PGVDPILGPEMRSTGEVMGVGRTFAEAFSKAMLGSNSGMKKQGRALLSVREGDKARVVDL
AASLLKQGFELDATHGTAVVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIVNTTAGR
QAIEDSKLIRRSALQYKVHYDTTLNGGFATAMALKADPTEQVTSVQEMHARIGK
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtacagacataaaaagcatcctgatcctcggcgctggcccgattgttatc
ggccaggcgtgtgagttcgactactcgggcgcccaggcgtgtaaagcgctgcgcgaagag
ggttaccgcgtcattctggtcaactccaacccggcgaccatcatgaccgacccggaaatg
gccgatgcgacctacattgagccgatccactgggaagtggtgcgcaagatcatcgaaaaa
gagcgtccggatgcggttctgccgaccatgggcggccagacggcgctgaactgcgcgctg
gagctggagcgtcagggcgtgctggccgagttcggcgtcaccatgatcggcgcaactgcc
gatgccatcgacaaggccgaagaccgccgccgtttcgacgtggcgatgaagaaaatcggt
ttggataccgcgcgttccggcatcgcgcacaccatggaagaagcgctggcggtagccgct
gacgtcggcttcccgtgcatcatccgtccttcctttaccatgggcggcaccggcggcggc
atcgcctacaaccgcgaagagttcgaagagatctgcgaacgcggtctggacctgtcgccg
accaacgagctgctgatcgacgaatcgctgatcggttggaaagaatacgagatggaagtg
gtgcgtgataagaacgacaactgcatcatcgtttgctccatcgaaaacttcgacgccatg
ggcatccacaccggcgactcgatcaccgttgcgccggcccagaccctgaccgataaggaa
taccaaatcatgcgcaacgcctcgatggcggtgctgcgtgagatcggcgttgaaaccggc
ggctccaacgtgcagttctcggttaacccgaaaaccggccgcctgattgtcatcgagatg
aacccgcgcgtgtcgcgctcttcggcgctggcgtcgaaagccaccggcttcccgatcgcc
aagatcgccgccaaactggcggtgggctataccctcgatgagctgatgaacgacatcacc
ggcggccgcaccccggcgtcgttcgagccgtccatcgactacgtcgtgaccaagatcccg
cgcttcaacttcgagaagttcgccggcgccaacgatcgcctgactacccagatgaagtcg
gtcggcgaagtgatggccatcggccgcactcagcaagagtcgctgcagaaagcgctgcgc
ggtctggaagtgggcgccaccggcttcgatccgaaagtgagcctggacgatccggaagcg
ctgaccaaaatccgccgcgagctgaaagacgccggttccgaccgcatctggtacatcgcc
gacgccttccgcgccggtctgtcggtcgacggcgtcttcaacctgaccaacgtcgatcgc
tggttcctggtgcagattgaagagctggtgcgcctggaagagcaggtagccgaagcgggc
atcaacggcctggacaaagacttcctgcgcacgttgaagcgcaagggcttcgccgatgcg
cgtctggccaagctggccggcgtcgccgagagcgaaattcgcaagctgcgccacagccac
ggcctgcatccggtgtacaagcgcgtggatacctgcgcggcggaattcgctaccgacacc
gcctacatgtactccacctatgaagaagagtgcgagtccaacccgaccaacgaccggccg
aaagtgatggtgctgggcggcgggccgaaccgtatcggtcagggcatcgagttcgactac
tgctgcgtgcacgcttcgctggcgctgcgtgaagacggctacgagaccatcatggtcaac
tgcaacccggaaaccgtctccaccgactacgacacctcggaccgcctgtactttgagccg
gtgaccctggaagacgtgctggaaatcgtgcgcatcgagaaaccgaaaggcgttatcgtg
cagtacggcggccagaccccgctgaagctggcgcgcgagctggaagccgcaggcgtgccg
atcatcggcaccagcccggacgccatcgaccgtgccgaagaccgcgaacgcttccagcag
gcggtcaaccgcctgggcctgaagcagccggccaacgccaccgtcaccgccatcgagcag
gcggtcgagaaggcggcgggcatcggttatccgctggtggtgcgtccttcctacgtgctg
ggcggccgggcgatggaaatcgtctatgacgaaaccgacctgcgccgctacttccagacc
gcggtcagcgtgtccaacgatgcgccggtgttgctggaccgcttcctggacgacgcggtg
gaagtggacgtcgatgctatctgcgacggcgagcgcgtgctgattggcggcatcatggag
cacatcgagcaggcgggcgtgcactccggcgactccgcgtgttcgctgccggcgtacacc
ctgagccaggaaattcaggacgtgatgcgtcgccaggtggaaaaactggcgttcgagctg
caggtgcgcggcctgatgaacgtgcagttcgcggtgaaggacaacgaagtttacctgatt
gaagtcaacccgcgcgccgcgcgtaccgtgccgttcgtgtccaaagcgaccggcgtgccg
ctggccaaagtggccgcgcgcgtgatggcgggcaaaacgctggttgaacagggcgtgacc
gaagagatcatcccgccgtactactcggtgaaagaagtggtgctgccgttcaacaaattc
ccgggcgtcgacccgattttggggccggaaatgcgctctaccggggaagtgatgggcgtg
ggccgcaccttcgcggaagctttctccaaagcgatgctgggcagcaactcgggcatgaag
aaacagggccgcgcgctgctgtcggtgcgcgaaggcgacaaggctcgcgtggtcgatttg
gccgccagcctgctgaagcagggctttgagctggacgcgacccacggcaccgcggtggtg
ctgggcgaagcgggcatcaacccgcgcctggtcaacaaggtgcacgaagggcgtccgcac
attcaggaccgtatcaagaacggcgagtacacctacatcgtcaacaccacggcaggccgt
caggcgattgaggactccaagctgattcgccgcagcgccctgcagtacaaggtgcactac
gacactacgctgaacggcggcttcgccaccgcgatggcgctgaaagcggatccgaccgag
caggttacatcggtgcaggaaatgcacgcgcgtattggtaagtaa
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