Serratia ureilytica: J0X03_21795
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Entry
J0X03_21795 CDS
T07185
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
suri
Serratia ureilytica
Pathway
suri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
suri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J0X03_21795 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
suri03019
]
J0X03_21795 (pnp)
03016 Transfer RNA biogenesis [BR:
suri03016
]
J0X03_21795 (pnp)
Enzymes [BR:
suri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
J0X03_21795 (pnp)
Messenger RNA biogenesis [BR:
suri03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
J0X03_21795 (pnp)
Transfer RNA biogenesis [BR:
suri03016
]
Prokaryotic type
tRNA degradation factors
J0X03_21795 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_2
OB_RRP5_4th
aRib
S1_RRP5
KH_2
KH-I_KHDC4-BBP
KH_SLS1_2
UPF0181
DUF4172
Motif
Other DBs
NCBI-ProteinID:
QSR07004
LinkDB
All DBs
Position
complement(4604076..4606193)
Genome browser
AA seq
705 aa
AA seq
DB search
MLTPIIRKFQYGQHTVTIETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQSFFPLT
VNYQERTYAAGRIPGSFFRREGRPSEGETLTSRLIDRPIRPLFPDSFLNEVQVIATVVSV
NPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTTDELKESRLDLVVA
GTAGAVLMVESEADVLSEDQMLGAVVFGHDQQQVVIENINALVAEAGKPKWDWQAPAVNE
ALHARVAELAEARLGDAYHITEKQERYAQVDAIKDSVVETLLAQDETLDAGEIQDILGTV
EKNVVRSRVLRGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR
DAQNLDELMGEKTDSFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAMMPKPED
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEADNYVVLSD
ILGDEDHLGDMDFKVAGSRDGITALQMDIKIEGITREIMQVALNQAKGARLHILGVMEQA
ISTPRGDISEFAPRIHTIRINPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGEKAKFAIRRIEEITAEIEVGRIYQGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEAMAPEAGSPAPEAE
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
ttgctgacaccgatcattcgcaaattccagtatggccagcataccgtcaccatcgaaacc
ggtatgatggcgcgtcaggccaccgccgccgttatggtgagcatggatgacaccgccgta
ttcgttaccgtcgttggccagaaaaaagccaagccgggccagagcttcttcccgctgacg
gtgaactaccaagagcgtacctacgccgccggccgtatcccgggcagcttcttccgccgc
gaaggccgtccgagcgaaggcgagacgctgacttcccgtctgatcgaccgcccgatccgt
ccactgttcccggacagcttcctgaacgaagttcaggtgatcgcgaccgtggtttccgtt
aacccgcaggtgaacccggacatcgttgcgatgatcggcgcctctgccgccctgagcctg
tccggtattccgttcaacggcccaatcggcgccgcgcgcgtaggttacatcaacgatcag
tacgtactgaacccaacgaccgacgaactgaaagaaagccgtctggatctggtggttgcc
ggtaccgccggcgcggtgctgatggtggaatccgaagctgacgtgctgagcgaagatcag
atgctgggcgccgtggtgttcggccacgaccagcagcaagtggttatcgaaaacatcaac
gcgctggttgccgaagccggcaagccgaagtgggattggcaggcgcctgcggtcaacgaa
gcgctgcacgcgcgcgtggctgaactggccgaagctcgcctgggcgacgcttaccacatt
accgaaaaacaagagcgttacgctcaggttgacgcgatcaaagacagcgtggttgaaacc
ctgctggcgcaggacgaaacgctggacgccggcgaaatccaggacatcctgggcaccgtc
gagaagaacgtggtgcgcagccgtgtactgcgtggcgagccgcgtatcgacggccgtgaa
aaagacatgatccgtggcctggatgtgcgcaccggcgtactgccgcgcacccacggttcc
gcgctgttcacccgtggcgaaactcaggcgctggttaccgcgaccctgggcaccgcgcgc
gacgcacagaacctggacgagctgatgggcgagaagaccgacagcttcctgttccactac
aacttccctccgtactccgtaggcgaaaccggcatggtcggttctcctaagcgtcgtgaa
atcggtcacggtcgcctggcgaaacgcggcgtattggctatgatgcctaaaccggaagat
ttcccgtacacggttcgcgtggtgtctgaaatcaccgaatccaacggttcttcttccatg
gcttccgtgtgcggcgcgtctctggcgctgatggacgccggtgtgccaatcaaggctgcc
gttgcgggtatcgcgatgggcctggtgaaagaagccgataactatgtggttctgtccgac
attctgggtgacgaagatcacctgggcgacatggacttcaaagtggccggtagccgcgac
ggtatcaccgcgctgcagatggacatcaaaatcgaaggcatcacccgcgaaatcatgcag
gtggctctgaaccaggccaagggcgcgcgtctgcacatcctgggcgtaatggaacaggct
atcagcaccccgcgcggcgatatctccgaattcgcaccgcgtattcatactatccgcatc
aacccggataaaatcaaagacgtgatcggtaagggcggttccgttatccgcgcgctgacc
gaagagactggcactaccatcgaaattgaagatgatggtacagttaaaatcgctgcgacc
gacggtgagaaagcgaaattcgctatccgtcgcatcgaagagatcacggcagagatcgaa
gtgggccgtatctaccagggtaaagtgacccgtatcgttgatttcggcgcattcgtcgct
atcggcggtggtaaagaaggcctggtgcacatttctcagatcgccgacaagcgcgttgag
aaagtgaccgactatctgcagatgggtcaggaagtgccggttaaggtactggaagttgac
cgtcagggccgcgtgcgtctgagcatcaaagaagcgatggcgccggaagcaggttcacct
gcgcctgaagcagaataa
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