Serratia ureilytica: J0X03_22560
Help
Entry
J0X03_22560 CDS
T07185
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
suri
Serratia ureilytica
Pathway
suri00730
Thiamine metabolism
suri01100
Metabolic pathways
suri01240
Biosynthesis of cofactors
Module
suri_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
suri00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
J0X03_22560 (thiC)
Enzymes [BR:
suri01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
J0X03_22560 (thiC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
QSR07142
LinkDB
All DBs
Position
4765203..4767146
Genome browser
AA seq
647 aa
AA seq
DB search
MSNVNPPRARKAQREAAQQFIDTLQGMAFPNSRRIYLQGSRRDIQVPMREIQLSPTLVGG
SKDSPQYEQNEAIPVYDTAGPYGDPQAELDVHAGLAKLRAGWIDARGDTATLSGASSGFT
QQRLADEGLDHLRFEHLPLPRKALPGKCVTQLHYARAGIVTPEMEFIAIRENMGRERIRG
EVLCHQHPGQGWGANLPDNITPEFVRQEVAAGRAIIPANINHPEAEPMIIGRNFLVKVNA
NIGNSAVTSSIEEEVEKLVWATRWGADTVMDLSTGRYIHETREWILRNSPVPIGTVPIYQ
ALEKVNGVAENLTWEMFRDTLLEQAEQGVDYFTIHAGVLLRYVPMTAKRLTGIVSRGGSI
MAKWCLSHHQENFLYQHFREICEICAAYDVSLSLGDGLRPGSIQDANDEAQFAELHTLGE
LTKIAWEYDVQVMIEGPGHVPMQMIRRNMTEELEHCHEAPFYTLGPLTTDIAPGYDHFTS
GIGAAMIGWFGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAADLAKGHPGAQIRDN
AMSKARFEFRWEDQFNLALDPATARAYHDETLPQESGKIAHFCSMCGPKFCSMKISQEVR
DYAAAQEAAKPIEVQLTGMEKMSAEFRARGSELYHSAGNLQEETSND
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgtctaacgttaatccaccgcgcgcccgtaaagcgcaacgcgaagccgcccagcagttt
atcgacacgctgcaaggcatggctttcccaaactcacgccgcatctacctgcagggctcg
cgccgcgatatccaggtgccgatgcgcgaaattcagctcagcccgaccctggtcggcggc
agcaaagatagcccgcagtatgaacagaacgaggcgatcccggtatatgacaccgcaggc
ccatacggcgatccgcaggccgagctcgatgtgcacgccggcctggccaagctgcgcgcc
ggctggatcgacgcgcgcggcgataccgcgaccctgagcggcgccagttccggcttcacc
caacagcgtctggcggacgaggggctggatcacctgcgcttcgaacatctgccgctgccg
cgcaaggcgttgccgggcaagtgcgtgacccaactgcactatgcccgcgccggcatcgtc
accccggagatggagttcatcgccatccgtgaaaacatggggcgcgaacgcattcgcggc
gaggtgctgtgccaccagcatccgggccagggctggggcgccaacctgccggacaacatc
acgccggagttcgtgcgccaggaagtggccgccggccgcgccatcattcccgccaacatc
aatcacccggaggcggagccgatgatcatcggccgcaatttcctggtgaaggtgaacgcc
aatatcggcaactcggcggtcacgtcgtcgatcgaagaagaggtggagaagctggtgtgg
gccacccgctggggcgcagacaccgtgatggatctctccaccggccgctacattcacgaa
acccgcgagtggatcctgcgcaacagcccggtgcccatcggcaccgtgcctatctaccag
gcgctggagaaggtcaacggcgtggcggaaaacctcacctgggagatgttccgcgatacg
ctgctggaacaggctgaacaaggggtcgattacttcaccatccacgccggcgtgctgctg
cgctacgtgccgatgaccgccaaacgcctgaccggcatcgtgtcgcgcggcggctcgatc
atggccaaatggtgtctgtcgcaccatcaggaaaacttcctctatcagcacttccgtgaa
atctgcgagatctgcgccgcctacgacgtttcgctgtcgctcggcgacggcctgcgcccc
ggttcgattcaggacgccaacgacgaggcccagttcgccgagctgcatacgctgggcgag
ctgaccaaaatcgcctgggaatacgacgtacaagtgatgattgaaggcccgggccacgtg
ccgatgcagatgatccgccgcaacatgaccgaagagctggaacattgccacgaagcgccg
ttctacacccttggcccgctgaccaccgatatcgccccgggctatgaccatttcacctcc
ggcatcggcgcggcgatgattggctggttcggctgcgccatgctgtgttacgtcacgccg
aaagagcacctcggcctgccgaataaagaggacgtcaaacagggcctgatcacctacaag
atcgccgcccacgccgccgatctggccaaaggccatccgggcgcgcagatccgcgataac
gccatgtccaaggcgcgtttcgaattccgctgggaagatcagttcaatctggcgctcgat
ccggccaccgcgcgcgcctatcacgacgaaaccctgccgcaggagtccggcaagatcgct
cacttctgctcgatgtgcggaccgaaattctgctcgatgaagatttcacaagaggtgcgc
gactacgccgccgcccaagaggccgccaaaccgatcgaggtgcagctgaccggcatggaa
aaaatgtccgccgagttccgcgcccgcggcagcgagctgtatcacagcgccggcaatctg
caggaggagacgagcaatgactga
DBGET
integrated database retrieval system
