Serratia ureilytica: J0X03_23065
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Entry
J0X03_23065 CDS
T07185
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
suri
Serratia ureilytica
Pathway
suri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
suri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J0X03_23065 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
suri03019
]
J0X03_23065 (recQ)
03400 DNA repair and recombination proteins [BR:
suri03400
]
J0X03_23065 (recQ)
Enzymes [BR:
suri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J0X03_23065 (recQ)
Messenger RNA biogenesis [BR:
suri03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
J0X03_23065 (recQ)
DNA repair and recombination proteins [BR:
suri03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
J0X03_23065 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
zf-CXXC
DUF6972
Motif
Other DBs
NCBI-ProteinID:
QSR07231
LinkDB
All DBs
Position
complement(4869776..4871608)
Genome browser
AA seq
610 aa
AA seq
DB search
MSTAAVINRELLAEQVLRDTFGYQQFRPGQQTIINAAIGGQDCLVVMPTGGGKSLCYQIP
ALVMDGLTLVVSPLISLMKDQVDQLLAYGVSAACYNSTQTREEQLDVMAGCRNGTIKMLY
IAPERLMMESFLNLLDHCPPAMLAVDEAHCISQWGHDFRPEYRALGQLKQRFPSMPVIAL
TATADEATRGDIVRLLSLQDPLVQVSSFDRPNIRYTLVEKFKPLDQLWRFVQDQRGKSGI
IYCNSRAKVEDTAARLQSRGLSVGAYHAGLDNDRRAQVQEAFQRDDLQVVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAILLYDPADMAWLRRCLEEKPAGQQ
LDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGKHENCGNCDICLDPPKRYDGLEDARKAL
SCVYRVGQRFGLGYIVEVLRGSNNQRIREYGHDKLPVYGIGRDQTTEHWTSVLRQLIHLG
FITQNIAMHSALQLTEAARPVLRGEVALQLAVPRIQSLKSRSSANQKSYGGNYDRKLFAK
LRKLRKSIADEENIPPYVVFNDATLLEMAEQMPIKAGDLLSVNGVGQRKLERFGAPFMAM
IRDHLDNDED
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaaccgcagcagtgattaacagagagttgctggccgagcaggtattgcgcgatacc
ttcggctaccagcaattccgtccggggcagcaaacgattatcaatgccgcgatcggcggg
caggattgcctggtggtgatgccgaccggcggcggcaagtcgttgtgttaccaaatccct
gcgctggtgatggacggcctgacgctggtcgtttctccgctgatctcgctgatgaaggat
caggtcgaccaactgttggcctacggcgtttccgccgcctgctacaactcgacgcaaacc
cgcgaggagcagctggacgtcatggccggctgccgcaacggcaccatcaagatgctgtac
atcgcgccggagcggctgatgatggaaagcttcctcaacctgctcgatcactgcccgccg
gcgatgctggcggtggatgaggcgcactgcatctcccaatggggccacgacttccggccg
gaataccgcgcgctggggcagttgaaacagcgcttcccgtcgatgccggtgatcgcgttg
accgccactgccgacgaagccacgcgcggcgatatcgtgcgtctgctgtcgctgcaggat
ccgctggtgcaggtcagcagcttcgaccgaccgaacatccgctacacgctggtggaaaaa
ttcaaaccgctcgaccagctgtggcgcttcgtgcaggatcagcgcggcaagagcggcatt
atctattgcaacagccgcgccaaggtggaagacaccgccgcgcgcctgcaaagccgcggg
ctgagcgtcggcgcttaccacgcggggctggacaacgatcgccgcgcccaggtgcaggag
gcgttccagcgtgacgatctgcaggtggtggtggccaccgtcgccttcggcatgggcatt
aacaaacccaacgtgcgttttgtggtgcatttcgacatcccgcgcaatatcgaatcctat
tatcaggagaccggccgcgccgggcgcgacggcctgccggccgaagccatcctgctgtac
gatcccgccgacatggcctggctgcgccgctgtctggaggagaaacccgccgggcaacag
ctggacatcgagcgtcacaagctgaacgccatgggcgctttcgccgaggcgcaaacctgc
cgtcgcctggtgctgctcaattacttcggcgaaggcaagcacgaaaactgcggcaactgc
gatatctgcctcgatccgcccaagcgctacgacgggctggaggacgcgcgcaaggcgctg
tcttgcgtgtaccgcgtcggccagcgctttggcctcgggtacatcgtggaagtgctgcgc
ggatccaacaatcagcgcattcgcgaatacggtcacgacaagctgccggtgtacggcatt
ggccgcgatcaaaccacggagcactggaccagcgtgctgcgtcagctgatccacctgggc
tttatcacccagaacatcgccatgcactcggcgctgcaattgaccgaggcggcgcgtccg
gtgttgcgcggcgaggtggcgctgcagctggcggtgccgcgcattcagagcctgaagtcg
cgcagcagcgccaaccagaaatcctacggcggcaattacgatcgcaagctgttcgccaag
ctgcgcaaactgcgcaagtcgatcgccgacgaagaaaacattccaccctacgtggtgttc
aacgacgccacgctgctggaaatggccgaacagatgccgatcaaggccggcgatctgctg
agcgtcaacggcgtggggcagcgcaaactggagcgtttcggcgcgccctttatggcgatg
atccgcgaccatctcgacaatgacgaagactga
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