Serratia ureilytica: J0X03_23245
Help
Entry
J0X03_23245 CDS
T07185
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
suri
Serratia ureilytica
Pathway
suri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
suri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J0X03_23245 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
suri03019
]
J0X03_23245 (rhlB)
Enzymes [BR:
suri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
J0X03_23245 (rhlB)
Messenger RNA biogenesis [BR:
suri03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
J0X03_23245 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CCDC138_C
ERCC3_RAD25_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QSR07262
LinkDB
All DBs
Position
4906639..4907925
Genome browser
AA seq
428 aa
AA seq
DB search
MSKTHLTEQKFSDFALHPLVLEALEKKGFHNCTPIQALALPLTLSGRDVAGQAQTGTGKT
LAFLASTFHYLLTHPAKQDRQTNQPRALIMAPTRELAVQIHSDAEALSQSTGLKLGLAYG
GDGYDKQLKVLESGVDILIGTTGRLIDYTKQNYVDLGAMQVVVLDEADRMYDLGFIKDIR
WLFRRMPAADQRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSN
EEKMRLLQTLIEEEWPDRAIIFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILD
DFTKGNLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA
CEEYALNLPAIETYIDHSIPVSKYNSDALLTDLPAPKRLSRPRGGNGPRRNSAPRRGGAP
RSNRKRSS
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacacacttgaccgaacagaagttttccgacttcgccctgcacccgttagtc
cttgaagcccttgagaaaaaagggtttcacaattgcacgcccatccaggcgttagcattg
ccgctcacgctctccgggcgtgacgttgcaggtcaggcgcaaaccggtaccggaaagacg
ctggcgtttttggcgtctacttttcactatttgctgacccacccggcgaaacaggatcgc
cagaccaatcagccgcgcgccttgatcatggcgcctacgcgtgaactggcggtgcaaatc
cactccgatgcggaagccctctcccagagcaccggcctgaagctgggcctggcctacggc
ggcgacggctacgacaaacagctgaaagtgctggaaagcggcgtggacattctgattggc
accaccggccgtttaatcgattacaccaagcagaactatgtcgatctcggcgcgatgcag
gtcgtcgtgctggatgaagccgatcgcatgtacgatctcggctttatcaaagacatccgc
tggctgttccgccgcatgcctgcggccgatcaacgcctgaacatgctgttctccgccacg
ctgtcctatcgcgtacgcgaactggccttcgagcagatgaacaacgccgaatatgttgaa
gtggaaccggaacagaaaaccggccaccgcattaaagaagagctgttctacccgtccaac
gaagaaaaaatgcgtctgctgcagacgctgatcgaagaagagtggccggatcgcgccatc
atcttcgccaacaccaagcaccgctgcgaagacatctggggccacctggccgccgacggt
caccgcgtcggcctgctgaccggcgacgtggcgcagaaaaaacgcctgcgcatcctcgac
gacttcaccaagggtaatctggatatcctggtcgccaccgacgtcgccgcgcgcggtctg
cacattcccgccgtcacgcacgtcttcaactacgatctgcctgacgactgcgaagactac
gtgcaccgcatcggtcgtaccggccgagcaggcgccagcggccactccatcagcctggct
tgtgaagagtacgcgctcaacctgccggcgatcgagacctatatcgatcacagcattccg
gtgagcaagtacaacagcgatgcgctgctgaccgatctgccggcgccgaagcgcctgtcg
cgtccgcgcggcggcaacggcccacgtcgcaactccgcgccacgtcgcggcggcgcgccg
cgcagcaaccgtaaacgctcgagctga
DBGET
integrated database retrieval system
