Serratia ureilytica: J0X03_23275
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Entry
J0X03_23275 CDS
T07185
Symbol
hmsP
Name
(GenBank) biofilm formation regulator HmsP
KO
K26149
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
suri
Serratia ureilytica
Brite
KEGG Orthology (KO) [BR:
suri00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
J0X03_23275 (hmsP)
Enzymes [BR:
suri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
J0X03_23275 (hmsP)
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GFIT
Motif
Pfam:
EAL
GAPES3
GGDEF
HAMP
Motif
Other DBs
NCBI-ProteinID:
QSR07268
LinkDB
All DBs
Position
complement(4915225..4917231)
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AA seq
668 aa
AA seq
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MRVRRSLTIKQMATVSGVALVTICIFIVIQLFHFVQQRRDDYAQQLENIAHSVRQPLAEA
VLRMDVPEAKRVLNTLLPVGILSRADIVLPNEFQALHANFPPERPVPTLIARLFELPIQI
SVPLYSLERVPANQQPLAYLVLQADSFRMYQFILSILSTMLSTYLLLALILSVSITWCMN
RLMVHPLRAMAKELENISQDEAPYHQLMLPALHQDDELGLLVRNYNRNQQTLAKAHADMS
RLSTRHPVTELPNPALLNALLEQHIASSLRPERFNLLVIGIETLHEASGVMSPAMREALL
LALAKKLRGCIDENGVLAQLSNTEFAILAKGIERPFHAMQLARRIMAEINAPLTLEGLAL
RPNASIGIAHYLNQGESAEQLLRSATSAMMSAHREGKNQILFFEPSLTERTQKRLTQESE
ILHGIEQRHFTLFLQPQIDMQSNEVIGAEALLRWQQYDGSYTLPADVIPLAEELGVIVPL
GNWVLEESCRILADWQQRGIALPLAVNVSGIQMQDEAFVPHLKNLLAQYRIDPRKLLLEI
TETVRIDDLDRALALLRELHDLGLSIALDDFGMGYSSLEYLNRLKSLPIDLIKIDRSFIQ
GLPADDAMVRIVSSISEVLALPVMAEGVENAEQRDWLLKHGIRSGQGFLFARPLPREAFE
TEFCRAAP
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
ttgcgggtcaggcgttcgttaacgattaagcagatggcgacagtgtccggcgtggcgctg
gttacgatctgcatctttatcgtgatccagttattccactttgtgcagcagcgcagggat
gactacgcccagcaactggagaatatcgcccactccgtgcgccagccgctggcggaggcg
gtgctgcgcatggacgtgccggaagccaaaagggtgctgaacacgctgttgccggtcggc
attctcagccgggcggatatcgtcttgccgaacgagtttcaggcgctgcacgccaatttc
ccgccggagcggccggtgccgacgctgatcgcccggctgtttgagctgcctatccaaatt
tccgtgccgctctattcgctggaacgggtgccggccaaccagcagccgctggcctacctg
gtgctgcaggccgattcgttccgcatgtaccagtttatcctcagcattttgtcgaccatg
ctgtcgacctacctgctgctggcgctgatcctgtcggtgtccatcacctggtgcatgaac
cggctgatggtgcatccgctgcgcgcgatggccaaagagctggagaacatctcgcaggac
gaagcgccctatcatcaactgatgctgccggcgctgcaccaggatgatgagctcggcctg
ctggtgcgcaattacaaccgcaatcaacagacgctggccaaggcgcatgccgacatgagc
cgcctgagcacccgccacccggtgaccgaactgcccaacccggccttgctgaacgcgttg
ctggaacagcatatcgcctccagcctgcgccccgagcgttttaacctgctggtgatcggc
atcgagacgctgcatgaagcgtcgggcgtgatgagcccggcgatgcgcgaggcattgctg
ttggcgctggcgaagaagctgcgcggctgcatcgacgaaaacggcgtgctggcacagctt
agcaataccgaattcgccatcctggccaagggcatcgagcggccgttccacgccatgcag
ctggcgcggcgcatcatggcggagatcaacgcgccgttgacgctggaaggactggcgctg
cggcccaacgccagcatcggcatcgcccactacctcaatcagggggagagcgcggaacag
ctgctgcgcagcgccacctcggcgatgatgtccgcacatcgcgaagggaaaaatcagatc
ctgttcttcgaacccagcctgacggagcgcacgcagaagcgattgacgcaggagagcgag
atcctgcacggtattgagcagcggcatttcacgctgttcctgcagccacagatcgacatg
cagtccaacgaggtgattggcgcagaagcgttgctgcgctggcagcagtacgacggcagc
tataccctgccggccgacgtcattccgctcgcggaagagctgggcgtgattgtgccgctc
ggcaactgggtgctggaagagtcctgccgtatcctggcggactggcagcagcgcggcatt
gcgctgccgctggctgtcaacgtttccggcattcagatgcaggacgaggcgtttgttccg
catctgaaaaatctgctggcgcagtatcgaatcgatccgcgcaagctgctgctggagatc
accgagacggtacgcatcgatgatctcgaccgcgcgctggcgctgctgcgcgagctgcac
gatctggggctgtcgatcgcgttggacgacttcggcatgggctactccagcctggagtac
ctgaaccggttgaaatccctgccgatcgatttgattaaaatcgaccgcagtttcattcag
gggctgccggccgacgatgcgatggtgcgcatcgtcagttcaatctctgaagtgctggcg
ttgccggtgatggccgaaggcgtggaaaacgccgagcagcgcgactggctgctgaagcac
ggcattcgcagcgggcaagggttcctgttcgctcggccgctgccgcgtgaagcgttcgaa
accgagttttgccgcgcggcgccgtga
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