KEGG   Serratia ureilytica: J0X03_24115
Entry
J0X03_24115       CDS       T07185                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
suri  Serratia ureilytica
Pathway
suri03030  DNA replication
suri03410  Base excision repair
suri03420  Nucleotide excision repair
suri03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:suri00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    J0X03_24115 (polA)
   03410 Base excision repair
    J0X03_24115 (polA)
   03420 Nucleotide excision repair
    J0X03_24115 (polA)
   03440 Homologous recombination
    J0X03_24115 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:suri03032]
    J0X03_24115 (polA)
   03400 DNA repair and recombination proteins [BR:suri03400]
    J0X03_24115 (polA)
Enzymes [BR:suri01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     J0X03_24115 (polA)
DNA replication proteins [BR:suri03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     J0X03_24115 (polA)
DNA repair and recombination proteins [BR:suri03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     J0X03_24115 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     J0X03_24115 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc HHH HHH_5 Ribosomal_60s
Other DBs
NCBI-ProteinID: QSR07419
LinkDB
Position
5098037..5100835
AA seq 932 aa
MAQIAENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLLLQYQPSHVAV
VFDAKGKTFRDDLFAEYKSHRPPMPDDLRAQIEPLHSMVKAMGLPLLVTPGVEADDVIGT
LALEAEKAGHAVLISTGDKDMAQLVTPNVTLINTMNNTILGPQEVCDKYGIPPELIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGIGGLDALYGNLENIATLSFRGAKTMAAKLEQNK
EVAYLSYKLATIKTDVELDLTCADLTVSAPDVDTLQQLFKQYEFKRWLADVEAGVWLENK
KGAGAKAAGAAKPAVAAEAPKALAEAKLSQDGYVTILDEATFTDWLARLKKADVFAFDTE
TDGLDTLTANLIGLSFAIAPGEAAYLPVAHDYLDAPAQLDRAYVLEALKPLLEDEKALKV
GQNLKFDMSLLARYGIEMRGIAYDTMLESYVLDSVGGRHDMDSLADRYLGHKTITFEEIA
GKGKNQLTFNQIALEQAAPYAAEDADVTLQLHLAMWPQLKQSAELLTVFNEIEMPLLPVL
SHIERTGVLIDPAILSAHSQELAKRLAELEAQAHELAEEPFNLASTKQLQAILYEKQKLP
VLKKTPGGAPSTNEEVLAELALDYPLPKVILEYRGLAKLKTTYTDKLPLMINPVSGRVHT
SYHQAVTATGRLSSSDPNLQNIPVRNEEGRRIRQAFIAPEGYRIVAADYSQIELRIMAHL
SQDEGLLKAFAEGKDIHRATASEVFGVPLDKVTGEQRRSAKAINFGLIYGMSAFGLARQL
GIPRGEAQRYMDLYFERYPGVLDYMERTRQQASEQGYVSTLDGRRLYLPDVRSSNAMRRK
AAERAAINAPMQGTAADIIKRAMIEVDAWLQGQEKPLVRAIMQVHDELVFEVHESVIDEA
SQRIRQLMEGSMTLAVPLKVDVGVGMNWDEAH
NT seq 2799 nt   +upstreamnt  +downstreamnt
atggcccagattgcagaaaacccactaatcctggttgacggttcctcctacctctaccgc
gcttatcacgccttcccgccgctgaccaactcggcgggcgagccgaccggcgcgatgtac
ggcgtgctgaatatgctgcgcagcctgctgctgcagtatcaaccgagccacgttgccgtg
gtgtttgatgccaaagggaaaaccttccgcgatgatctcttcgctgaatacaaatcacac
cggccgccgatgccggacgatctgcgcgcgcagatcgagccgctgcacagcatggtcaag
gcgatgggcctgccgctgctggtgacacccggcgttgaggcggacgacgttatcggtacg
ctggcgctggaggccgaaaaggccggccatgcggtgctgatcagcaccggcgacaaagac
atggcgcagctggtgacgccgaacgtcaccttgatcaacaccatgaacaacacgatcctc
ggcccgcaggaagtgtgcgacaaatacggcattccgccggagctgatcatcgacttcctg
gcgctgatgggcgattcatcggacaacattcccggcgtgccgggcgtgggcgagaaaacc
gcccaggcgttgctgcagggtatcggcggcctggatgcgctgtacggcaatctggagaac
atcgccacgctgagcttccgcggcgccaaaaccatggcggccaagctggaacagaataaa
gaggtcgcgtacctctcctataagctggcgacgatcaaaaccgacgtcgagctggatctg
acctgtgcggacctgacggtctccgcgccggatgtcgacacgctgcaacagctgttcaaa
cagtacgagttcaaacgctggctggcggacgtagaagccggcgtctggttggaaaacaag
aaaggcgcgggcgcgaaagctgccggcgccgccaaaccagctgtagccgcggaagcgccg
aaagcgctggcggaggccaagctgtctcaggacggttatgtcaccatcctggacgaagcg
acctttaccgactggctggcgcggttgaaaaaagccgacgtgtttgccttcgataccgaa
accgatggcctggataccctgaccgccaatctgatcggcctgtcctttgcgatcgcgccg
ggcgaagcggcttatttgccggtggcgcacgattatctggatgcgccggcgcagctggat
cgcgcttacgtgctggaggcgctcaagccgctgctggaagacgagaaagcgctcaaggtc
gggcaaaatctgaagttcgatatgagcctgctggcgcgttatggcatcgagatgcgcggc
atcgcctacgacaccatgctggagtcctatgtgctggacagcgtcggcggccgtcatgat
atggacagcctggccgatcgttatcttggccacaaaaccatcaccttcgaagagatcgcc
ggcaagggcaagaaccagctgacgttcaatcagatcgcgcttgagcaggcggcgccatac
gctgccgaagacgccgatgtcacgctgcagctgcatctggcgatgtggccgcagctgaaa
cagagcgcggaactgctgacggtgttcaacgagattgaaatgccgctgctgccggtgctg
tcgcatatcgaacgcaccggggtgctgatcgatccggccattttatcggcccactcccag
gagctggccaagcgtctggctgagctggaggcgcaggcccacgagctggcggaagagccg
ttcaacctggcgtcgaccaagcagctgcaggctatcttgtacgaaaaacaaaagctgccg
gtgctgaagaaaaccccgggcggggcgccatccaccaacgaagaagtgctggccgagctg
gcgctcgactacccgctgccgaaggtgattctggaataccgcggcctggcgaagctgaag
accacctataccgacaagctgccgctgatgatcaatccggtcagcgggcgggtgcatacc
tcgtaccatcaggcggtgaccgccaccggccgcctctcctcgagcgatccgaacctgcag
aacatcccggtgcgcaacgaagaagggcggcgcattcgccaggcctttattgcgccggaa
ggctaccgcattgtcgcggccgactactcgcagatcgagctgcgcatcatggcgcatctg
tctcaggatgaagggctgctgaaggccttcgccgaagggaaagacattcaccgcgccacg
gcgtcggaagttttcggcgtgccgttggataaagtgaccggcgagcagcgccgcagcgcc
aaggcgattaactttggtttgatttacggcatgagcgccttcggccttgcgcgtcagctg
gggatcccgcgtggggaagcccagcgctatatggatctctacttcgaacgttacccgggc
gtgctggattacatggagcgcacccgtcagcaggcttccgagcagggctatgtcagcacg
ctggacggccgccgtctgtatctgccggacgtccgctccagcaacgccatgcgccgcaag
gcggccgagcgcgccgccatcaacgccccgatgcagggcacggcggccgatatcatcaag
cgtgcgatgatcgaggtcgacgcctggctgcaggggcaggagaagccgttggtgcgcgcg
atcatgcaggtgcacgatgaattggtgttcgaggtgcacgagtcggtgatcgacgaagcc
agccaacgtatccgccaactgatggaaggcagcatgacgctggcggtgccgctgaaggtc
gatgtgggcgtcggcatgaactgggatgaggcgcactga

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