Serratia ureilytica: J0X03_24115
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Entry
J0X03_24115 CDS
T07185
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
suri
Serratia ureilytica
Pathway
suri03030
DNA replication
suri03410
Base excision repair
suri03420
Nucleotide excision repair
suri03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
suri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J0X03_24115 (polA)
03410 Base excision repair
J0X03_24115 (polA)
03420 Nucleotide excision repair
J0X03_24115 (polA)
03440 Homologous recombination
J0X03_24115 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
suri03032
]
J0X03_24115 (polA)
03400 DNA repair and recombination proteins [BR:
suri03400
]
J0X03_24115 (polA)
Enzymes [BR:
suri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J0X03_24115 (polA)
DNA replication proteins [BR:
suri03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
J0X03_24115 (polA)
DNA repair and recombination proteins [BR:
suri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
J0X03_24115 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J0X03_24115 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
HHH_5
Unstab_antitox
Ribosomal_60s
Motif
Other DBs
NCBI-ProteinID:
QSR07419
LinkDB
All DBs
Position
5098037..5100835
Genome browser
AA seq
932 aa
AA seq
DB search
MAQIAENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLLLQYQPSHVAV
VFDAKGKTFRDDLFAEYKSHRPPMPDDLRAQIEPLHSMVKAMGLPLLVTPGVEADDVIGT
LALEAEKAGHAVLISTGDKDMAQLVTPNVTLINTMNNTILGPQEVCDKYGIPPELIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGIGGLDALYGNLENIATLSFRGAKTMAAKLEQNK
EVAYLSYKLATIKTDVELDLTCADLTVSAPDVDTLQQLFKQYEFKRWLADVEAGVWLENK
KGAGAKAAGAAKPAVAAEAPKALAEAKLSQDGYVTILDEATFTDWLARLKKADVFAFDTE
TDGLDTLTANLIGLSFAIAPGEAAYLPVAHDYLDAPAQLDRAYVLEALKPLLEDEKALKV
GQNLKFDMSLLARYGIEMRGIAYDTMLESYVLDSVGGRHDMDSLADRYLGHKTITFEEIA
GKGKNQLTFNQIALEQAAPYAAEDADVTLQLHLAMWPQLKQSAELLTVFNEIEMPLLPVL
SHIERTGVLIDPAILSAHSQELAKRLAELEAQAHELAEEPFNLASTKQLQAILYEKQKLP
VLKKTPGGAPSTNEEVLAELALDYPLPKVILEYRGLAKLKTTYTDKLPLMINPVSGRVHT
SYHQAVTATGRLSSSDPNLQNIPVRNEEGRRIRQAFIAPEGYRIVAADYSQIELRIMAHL
SQDEGLLKAFAEGKDIHRATASEVFGVPLDKVTGEQRRSAKAINFGLIYGMSAFGLARQL
GIPRGEAQRYMDLYFERYPGVLDYMERTRQQASEQGYVSTLDGRRLYLPDVRSSNAMRRK
AAERAAINAPMQGTAADIIKRAMIEVDAWLQGQEKPLVRAIMQVHDELVFEVHESVIDEA
SQRIRQLMEGSMTLAVPLKVDVGVGMNWDEAH
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggcccagattgcagaaaacccactaatcctggttgacggttcctcctacctctaccgc
gcttatcacgccttcccgccgctgaccaactcggcgggcgagccgaccggcgcgatgtac
ggcgtgctgaatatgctgcgcagcctgctgctgcagtatcaaccgagccacgttgccgtg
gtgtttgatgccaaagggaaaaccttccgcgatgatctcttcgctgaatacaaatcacac
cggccgccgatgccggacgatctgcgcgcgcagatcgagccgctgcacagcatggtcaag
gcgatgggcctgccgctgctggtgacacccggcgttgaggcggacgacgttatcggtacg
ctggcgctggaggccgaaaaggccggccatgcggtgctgatcagcaccggcgacaaagac
atggcgcagctggtgacgccgaacgtcaccttgatcaacaccatgaacaacacgatcctc
ggcccgcaggaagtgtgcgacaaatacggcattccgccggagctgatcatcgacttcctg
gcgctgatgggcgattcatcggacaacattcccggcgtgccgggcgtgggcgagaaaacc
gcccaggcgttgctgcagggtatcggcggcctggatgcgctgtacggcaatctggagaac
atcgccacgctgagcttccgcggcgccaaaaccatggcggccaagctggaacagaataaa
gaggtcgcgtacctctcctataagctggcgacgatcaaaaccgacgtcgagctggatctg
acctgtgcggacctgacggtctccgcgccggatgtcgacacgctgcaacagctgttcaaa
cagtacgagttcaaacgctggctggcggacgtagaagccggcgtctggttggaaaacaag
aaaggcgcgggcgcgaaagctgccggcgccgccaaaccagctgtagccgcggaagcgccg
aaagcgctggcggaggccaagctgtctcaggacggttatgtcaccatcctggacgaagcg
acctttaccgactggctggcgcggttgaaaaaagccgacgtgtttgccttcgataccgaa
accgatggcctggataccctgaccgccaatctgatcggcctgtcctttgcgatcgcgccg
ggcgaagcggcttatttgccggtggcgcacgattatctggatgcgccggcgcagctggat
cgcgcttacgtgctggaggcgctcaagccgctgctggaagacgagaaagcgctcaaggtc
gggcaaaatctgaagttcgatatgagcctgctggcgcgttatggcatcgagatgcgcggc
atcgcctacgacaccatgctggagtcctatgtgctggacagcgtcggcggccgtcatgat
atggacagcctggccgatcgttatcttggccacaaaaccatcaccttcgaagagatcgcc
ggcaagggcaagaaccagctgacgttcaatcagatcgcgcttgagcaggcggcgccatac
gctgccgaagacgccgatgtcacgctgcagctgcatctggcgatgtggccgcagctgaaa
cagagcgcggaactgctgacggtgttcaacgagattgaaatgccgctgctgccggtgctg
tcgcatatcgaacgcaccggggtgctgatcgatccggccattttatcggcccactcccag
gagctggccaagcgtctggctgagctggaggcgcaggcccacgagctggcggaagagccg
ttcaacctggcgtcgaccaagcagctgcaggctatcttgtacgaaaaacaaaagctgccg
gtgctgaagaaaaccccgggcggggcgccatccaccaacgaagaagtgctggccgagctg
gcgctcgactacccgctgccgaaggtgattctggaataccgcggcctggcgaagctgaag
accacctataccgacaagctgccgctgatgatcaatccggtcagcgggcgggtgcatacc
tcgtaccatcaggcggtgaccgccaccggccgcctctcctcgagcgatccgaacctgcag
aacatcccggtgcgcaacgaagaagggcggcgcattcgccaggcctttattgcgccggaa
ggctaccgcattgtcgcggccgactactcgcagatcgagctgcgcatcatggcgcatctg
tctcaggatgaagggctgctgaaggccttcgccgaagggaaagacattcaccgcgccacg
gcgtcggaagttttcggcgtgccgttggataaagtgaccggcgagcagcgccgcagcgcc
aaggcgattaactttggtttgatttacggcatgagcgccttcggccttgcgcgtcagctg
gggatcccgcgtggggaagcccagcgctatatggatctctacttcgaacgttacccgggc
gtgctggattacatggagcgcacccgtcagcaggcttccgagcagggctatgtcagcacg
ctggacggccgccgtctgtatctgccggacgtccgctccagcaacgccatgcgccgcaag
gcggccgagcgcgccgccatcaacgccccgatgcagggcacggcggccgatatcatcaag
cgtgcgatgatcgaggtcgacgcctggctgcaggggcaggagaagccgttggtgcgcgcg
atcatgcaggtgcacgatgaattggtgttcgaggtgcacgagtcggtgatcgacgaagcc
agccaacgtatccgccaactgatggaaggcagcatgacgctggcggtgccgctgaaggtc
gatgtgggcgtcggcatgaactgggatgaggcgcactga
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