Sporosarcina ureilytica: BI350_04395
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Entry
BI350_04395 CDS
T08603
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
surl
Sporosarcina ureilytica
Brite
KEGG Orthology (KO) [BR:
surl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
surl03019
]
BI350_04395
Messenger RNA biogenesis [BR:
surl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BI350_04395
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Exo_endo_phos_3
Motif
Other DBs
NCBI-ProteinID:
AOV06882
UniProt:
A0A1D8JDU2
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All DBs
Position
864144..865082
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AA seq
312 aa
AA seq
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MKKLLDYQVGESVDLYLMIKQATKGITTKGSPFMTVILQDKSGDLEAKLWDTTDAHVEMY
CAGTIVRVGGDIHEYRGKNQLRIKAIRPAKEEEGVTIADLIPSSEKSKEVLFEELMAFFF
EMKNPQIQRITRHLLKKHEAAFKTYPAATRNHHDYVSGLIDHVVSMLNLGKAIAELYPSL
NKDLLYAGIILHDVGKVIELSGPIGTQYTVEGNLLGHITIMVNEIEKAAEELGIEGEEVM
LLQHMVLSHHGKEEWGSPKRPMLKEAEMLHYIDNIDAKMNMLDRALGQAKPGEFTERIFP
LENRSFYKPTFE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaattactggactatcaagtaggagaatcagtcgatttatatttaatgattaaa
caagcgacaaaaggcattacgacaaaaggcagtccttttatgacggtcattttacaagat
aagagtggagatttagaggcgaagttatgggatacgacagatgcccatgtagaaatgtat
tgcgcgggaacgattgtgagagttggtggagatattcacgaatatcgcggaaaaaatcaa
ctgcgtattaaagccattcgtccggctaaagaagaagaaggtgtgacgattgctgactta
attccatcctctgaaaaaagtaaagaagtattatttgaagaactaatggcattctttttt
gaaatgaaaaatccacaaatacaacgaattacaaggcatttattgaaaaaacatgaagca
gcattcaaaacgtatcctgctgctacaagaaatcatcatgactatgtgtctggcttaatc
gatcacgtcgtttcgatgttgaacttaggaaaggcaattgctgaactatatccttcctta
aataaagatttattgtacgcaggcattattttacatgatgttgggaaggtcattgaattg
tccggtccaattggtacgcagtatacggtagaaggaaatttactgggacacatcacaatt
atggtcaatgaaatcgagaaagcagcagaagaattgggcatcgaaggcgaagaagtgatg
ttgctacaacatatggtgttatcgcatcatggtaaagaagagtggggaagcccgaaacgt
ccaatgttaaaagaggcggaaatgcttcattacatcgacaatatcgatgcaaaaatgaat
atgctagaccgtgcacttggtcaagctaagccgggcgaatttacggaaagaatattccca
ttagagaatcgctcattttataagccgacatttgaataa
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