Sporosarcina ureilytica: BI350_06760
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Entry
BI350_06760 CDS
T08603
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
surl
Sporosarcina ureilytica
Pathway
surl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
surl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BI350_06760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
surl03019
]
BI350_06760
03400 DNA repair and recombination proteins [BR:
surl03400
]
BI350_06760
Enzymes [BR:
surl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BI350_06760
Messenger RNA biogenesis [BR:
surl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BI350_06760
DNA repair and recombination proteins [BR:
surl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BI350_06760
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
AOV07269
UniProt:
A0A1D8JEY4
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All DBs
Position
1335124..1336905
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AA seq
593 aa
AA seq
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MLIKATEVLRDYFGYDSFRTGQEQVIESVLQGKDTLCVMPTGGGKSLCYQVPALVMEGTV
LVISPLISLMKDQVDALKEAGISAAYINSTMTSEEYQETMEATIRGEYRLLYIAPERLDS
PSFTNRLQLMNVPIVAIDEAHCISQWGHDFRPSYRNIRKMVSLFHEKPVVLALTATATPA
VREDICSQLTIDEENTVMTGFERENLTFSVIKGQDREKFVIDYVKKNEGEAGIIYAATRK
AVDHLYEVLSKRGVPVGKYHAGLSDIMRQEGQEQFLNDETSVMIATNAFGMGIDKSNIRY
VIHYQMPRNMESYYQEAGRAGRDGLKSDCTLLFSSQDVQTQRFLIDQSLDESRIPMELQK
LQSMVDYCHTEVCLQKFIIQYFGEEDVSDCGRCANCTDTRESLDVTEDVQKVLSCVIRMG
QRFGKTMIAQVLTGSRNKKVKDFGFDKLTTYGILKGRSAKDVSDFIEFIISENYLGVEHG
QFPIIYVAEAGKDVLTGKQKVFRKVSVVTKQITVDNPLFEKLRALRRQLAQDAGVPPFVV
FSDKSLHDMVSRMPTTEEAFLEVNGVGLTKLERYGEPFLEEIQAYQNETVSTT
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
ttgctaataaaagcaacagaggttttacgagattattttggatatgactcgtttagaaca
ggacaggagcaagtcattgaaagtgttttgcaagggaaggacacgctatgtgtgatgccg
actggcggaggaaaatcactttgttatcaagtaccagcacttgtgatggaaggaactgtg
cttgtcatttcaccgctcatttcattgatgaaagaccaagtagatgcactgaaagaagca
gggatttcagcggcttatattaatagtacaatgacttcagaagaataccaggagacaatg
gaagcgacgattcgaggagagtatcgtttattatacattgcgcctgagcgacttgattct
ccttcttttacaaatcgtttgcaacttatgaacgtgccaattgtggccattgatgaagcc
cattgtatttctcaatggggccatgattttaggccgagctatcgaaatatccgtaaaatg
gtttctctttttcacgaaaagccggttgttctcgcattaacggcaacagcaacaccagcc
gttcgggaagatatttgttcacaactgacaattgacgaagaaaatacagtcatgacagga
ttcgagagagaaaacttaactttttcagtgattaaaggccaggacagagaaaaatttgtc
attgattatgtaaagaaaaatgagggcgaagcgggaattatctatgcggcaacgagaaag
gcagtcgatcatctgtatgaagtactttcaaaacgtggtgtacctgtaggaaagtatcat
gcaggtctgtctgacataatgcgtcaagaaggtcaagaacagtttttaaatgatgaaacg
tccgtcatgattgcgacaaatgcatttggaatgggaatcgataaatccaatatacggtat
gtgattcattaccaaatgccacgtaatatggaaagttattatcaagaagctggacgtgct
ggacgcgatgggttaaaaagtgattgtacattgttgttttcatcgcaagacgtgcaaacg
caacgctttttaatcgaccaatcattagatgaatcgagaattccgatggagttacagaag
ttacagtcaatggtcgattattgtcatactgaagtttgtttacagaagtttatcattcaa
tactttggcgaagaagatgtatccgattgtggtagatgtgcgaactgtacagatacacgg
gaaagcttagacgtgaccgaagacgtacagaaagtattatcttgcgtaattcggatgggc
caacgatttggtaaaacgatgattgcacaagtattaacaggatcgcgaaataaaaaagtg
aaagatttcggattcgataaattaacgacgtatggcattttaaaaggtagaagtgcaaaa
gacgtctctgattttattgagtttattatttcggaaaactatttgggggttgaacacggt
caatttccaattatttatgtggcagaggccggaaaagatgttttaacaggcaagcagaaa
gtgtttcgcaaagtatctgtcgtcacgaaacaaattacggtggacaatccgttatttgaa
aaacttcgtgcattacgccgtcaattagcgcaagacgctggcgttcctccgtttgttgtc
ttctcagataaatcgttacatgatatggtaagtcgcatgccaacgactgaagaggcgttt
ttagaagtcaatggtgtggggcttacgaagttggaaagatacggcgagccatttttggag
gaaattcaagcctatcaaaatgagactgtatcgactacttga
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