Sporosarcina ureilytica: BI350_12365
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Entry
BI350_12365 CDS
T08603
Name
(GenBank) RNA polymerase subunit sigma
KO
K02405
RNA polymerase sigma factor FliA
Organism
surl
Sporosarcina ureilytica
Pathway
surl02020
Two-component system
surl02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
surl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BI350_12365
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BI350_12365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
surl03021
]
BI350_12365
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
surl02035
]
BI350_12365
Transcription machinery [BR:
surl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BI350_12365
Bacterial motility proteins [BR:
surl02035
]
Flagellar system
Flagellar assembly proteins
Stator
BI350_12365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
DnaD_N
Oxidoreduct_C
TRIP4_3rd
BST2
Motif
Other DBs
NCBI-ProteinID:
AOV08248
UniProt:
A0A1D8JHR9
LinkDB
All DBs
Position
complement(2495610..2496392)
Genome browser
AA seq
260 aa
AA seq
DB search
MSKRDQVKEAEYWERWMLSRDPDAGNLLVEKYTPLVSYHVHRISAGLPNNISRDDIMSLG
LQGLFDALTKFDPGRDLKFDTYASFRIRGTIIDGLRKEDWLSRASRERTKKLQQEIEKLE
QKLMRHVTPEELATHLNVTVDDVYQTMHEQYFSNVLSLDEKIQDDDSDDPQTFVIKDERE
KTPEQDLLMNELLGDLTTKIQELNENEQLVLSLFYKEEFTLTEIGEVLSLSTSRISQIHS
RALFKLRKLLAPEVINGGVL
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacgggatcaggtaaaggaagctgaatattgggaacgatggatgctaagccgt
gacccagacgcggggaacttacttgtcgaaaaatatacccccctcgtttcgtatcacgtg
cacaggattagtgccggacttcccaacaatatttctagggatgatataatgagtcttggg
ttacaaggtttatttgacgcattaacgaaatttgatccaggcagggatttaaagttcgac
acttatgcttcgtttcgcatacgcggcacgataatcgatggtttacgaaaagaagattgg
ttatcacgcgcttccagagaacggacaaaaaaacttcaacaagaaatcgaaaaacttgaa
cagaaattaatgcgacatgtaacacccgaagaactggcgacgcatttaaatgtgacagta
gatgacgtgtatcaaacgatgcatgaacaatatttttcaaatgtgctatcactcgatgaa
aaaatacaagacgatgatagtgacgacccacaaacattcgtgattaaagatgaacgggaa
aaaacaccagaacaagatttactaatgaatgaattgctcggcgatttaacgaccaaaatt
caagagttaaacgaaaatgaacaacttgtattaagtttattctataaagaagaattcacg
ttaactgaaataggagaagtgctcagtttatctacttcccgtatttctcaaattcactcc
cgcgcattatttaagctaagaaaactattagctccagaagtaattaacggaggggtttta
tga
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