KEGG   Sporosarcina ureilytica: BI350_13220
Entry
BI350_13220       CDS       T08603                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
surl  Sporosarcina ureilytica
Pathway
surl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:surl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BI350_13220
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:surl03019]
    BI350_13220
Messenger RNA biogenesis [BR:surl03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BI350_13220
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B Lactamase_B_2 RMMBL Anti-Pycsar_Apyc1 CFAP54_N Mur_ligase_C DUF4453
Other DBs
NCBI-ProteinID: AOV08401
UniProt: A0A1D8JI57
LinkDB
Position
2668057..2669724
AA seq 555 aa
MNVIKNNETGVFALGGLGEIGKNTYGVQFQDEIILIDAGIKFPEDELLGIDYVIPDYSYL
ERNVDKIKGLFITHGHEDHIGGIPYLLRKVNVPVYGGKLALGLLRNKLEEHGLLRSTKMI
PIDEDDVIKFRKTSVTFYRTAHSIPDAFGVVVKTPSGNIVHTGDFKFDFTPVGEPADLTK
MAKIGGEGVLCLLSDSTNAEVPNFTLSERKVGDSLNEIFRKVNGRIIFATFASNIHRLQQ
VIEAAQEHGRKIAVFGRSMDNAIRIGRELGYIDAPEELFIDTHSLNRLQASEVMILCTGS
QGEPMAALSRIANGTHRQVQIHPGDTVIFSSSPIPGNTLSINKTINALFRAGAEVLHGSL
NNIHTSGHGSQEEQKLMLRLMKPKYFMPIHGEYRMMKMHTELAVDCDIQEENTFVLSNGD
VLALTENSARRAGRIPSGDVYIDGSGIGDIGNVVLRDRKMLSEDGLVIVVATIDKKKNRI
VSGPDLISRGFVYMRESGEMIQEAQRMLSKHVQRKLSNSAVQIPALKTEMIDVLGPYLYD
KTERKPMVLPVILEV
NT seq 1668 nt   +upstreamnt  +downstreamnt
atgaacgtgattaaaaataatgaaacaggcgttttcgctctaggcggactaggcgaaatc
ggaaaaaatacgtacggtgtccagtttcaagacgaaatcatcttaattgacgccggtatt
aagtttcctgaagatgagttactcggaatcgattatgtgatacccgattactcctattta
gaaagaaatgttgacaaaattaaaggactttttattacacatgggcatgaagaccatatc
ggtggaattccttatttacttcgcaaagtaaatgtacctgtttatggcggaaaacttgct
cttggattactgcgtaataagcttgaggaacatggcctactacgttcaactaaaatgatt
ccaatcgatgaagatgatgtgattaagttccgtaaaacgtctgttacattttacagaact
gcacacagtattcctgatgcttttggcgttgttgtcaaaacgccttctggaaacattgtc
catacgggagactttaaattcgattttacgcccgttggagagcctgccgacttaacgaaa
atggcgaaaattggtggcgaaggcgtactctgtttattatcggatagtacaaatgccgaa
gtaccaaacttcaccctttctgaacgtaaggttggcgacagcctaaatgaaatctttaga
aaagtgaatggccgtattatttttgcaacgttcgcttctaatatccatagattgcaacag
gtcattgaagcagcacaagaacatggccgtaaaattgcagtttttggacgaagtatggat
aatgcgatacgaatcggtcgtgaacttggctatattgacgcaccagaagaattgttcatt
gatacacattctttaaatcgacttcaagcaagcgaagtcatgattctctgtacaggtagc
caaggagaaccgatggcggctctatcacggattgctaacgggacgcatcgacaagtacaa
attcatcctggtgatacggtaatattctcatcttccccaataccgggaaatacactaagt
attaataagacaattaacgcgttgttccgtgccggagccgaagtgttgcatggttcttta
aataatattcatacttccggtcatggttctcaagaagaacaaaaactgatgcttagactt
atgaagccgaaatattttatgcccattcacggtgagtatcgtatgatgaaaatgcataca
gaactcgctgtcgattgcgatattcaggaagaaaatacatttgtattaagtaatggtgac
gtactagcactgactgaaaatagtgctagacgtgcaggacgtatcccatcaggcgatgtc
tatatcgacggtagcggaattggagatattggaaatgtcgtgttacgggaccgtaagatg
ctttcagaggacggtttggtgattgtagttgctacgattgacaaaaagaaaaaccgcatc
gtttcaggtccggatcttatttcaagaggatttgtttacatgcgtgagtctggcgaaatg
attcaagaagctcagcgaatgttaagcaaacatgtacaacgaaaactttcaaattcagct
gttcaaattccagcattaaaaactgaaatgattgatgttttaggaccttacttatacgac
aaaacagagcgtaaaccaatggtcctccctgtcatcttagaagtataa

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