Streptococcus urinalis: NCTC13766_00017
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Entry
NCTC13766_00017 CDS
T07856
Symbol
gidA
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
surn
Streptococcus urinalis
Brite
KEGG Orthology (KO) [BR:
surn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
surn03016
]
NCTC13766_00017 (gidA)
03036 Chromosome and associated proteins [BR:
surn03036
]
NCTC13766_00017 (gidA)
Transfer RNA biogenesis [BR:
surn03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
NCTC13766_00017 (gidA)
Prokaryotic type
NCTC13766_00017 (gidA)
Chromosome and associated proteins [BR:
surn03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
NCTC13766_00017 (gidA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
SAM_GIDA_C
GIDA_C_1st
Pyr_redox_2
FAD_oxidored
FAD_binding_2
HI0933_like
AlaDh_PNT_C
Pyr_redox
Motif
Other DBs
NCBI-ProteinID:
VEF30953
LinkDB
All DBs
Position
1:15566..17461
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AA seq
631 aa
AA seq
DB search
MSHTFTEDYDVIVIGAGHAGVEASLAASRMGCKTLLATINLDMLAFMPCNPSIGGSAKGI
VVREIDALGGEMGKNIDKTYIQMKMLNTGKGPAVRALRAQADKALYSREMKKTVENQENL
TLRQSMIDDILVEDGKVIGVLTATGQKFSAKAIIVTTGTALRGEIILGELKYSSGPNNSL
ASVTLADNLKKLGLEIGRFKTGTPPRVKASSIDYTLTEIQPGDEKPNHFSFLSKDEDYLK
DQIPCWLTYTNANSHDIINKNLYRAPMFSGIVKGVGPRYCPSIEDKIVRFADKERHQLFL
EPEGRDTEEVYVQGLSTSLPEDVQKDLLHSIKGLEKAEMMRTGYAIEYDIVLPHQLRATL
ETKVISGLFTAGQTNGTSGYEEAAGQGIVAGINAALKVQGKPELILKRSDAYIGVMIDDL
VTKGTLEPYRLLTSRAEYRLILRHDNADMRLTEIGRQVGLVDDERYSTYQIKKNKFDNEM
SRLEKIKIKPVKETNEKVKALGFKALTDAMTAKEFMRRPEVNYEAITHFIGPAAEYLDTK
IIDLLETEIKYEGYINKALDQVAKMKRMEEKRIPSNIDWDAIDSIATEARQKFKKINPET
IGQASRISGVNPADISILMVYLEGNNKARKK
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgtcacatacatttacagaagattacgatgttatcgtcattggtgctggacatgctggt
gtcgaagcaagtttagctgccagtcgaatgggatgtaaaaccttattagctacaattaat
cttgatatgttggcttttatgccttgtaatccttctattggtggttctgcaaaaggtatt
gttgttagagaaattgatgctcttggtggagaaatgggtaaaaatattgataaaacctat
atccaaatgaagatgcttaacactggtaaaggacctgctgttagagcgttaagggcgcaa
gctgacaaggctctttattcaagagaaatgaaaaaaacggttgaaaaccaagaaaattta
acattaagacaatcaatgattgatgatattttggtcgaagatgggaaagtaattggtgtt
ttaactgctacaggtcaaaaattctcagctaaagccattattgtaactacagggacagca
ttgagaggagaaattattttaggtgaattaaaatattcatccggaccaaataatagttta
gcctctgttactttagcagataacctaaaaaaattaggtttagaaattggtcgcttcaaa
actggaacacctccacgtgtaaaagcttcttctattgattatacccttacagaaattcag
cctggagatgaaaagccaaaccatttttcatttttatctaaagatgaagattatttaaaa
gaccaaatcccatgttggcttacttatacaaatgctaatagtcatgatattatcaataaa
aacttatatcgtgcaccaatgttttcaggtatagtaaaaggtgtaggtccacgatactgt
ccatctattgaagataaaatagtgagatttgctgataaagaaagacatcaactcttttta
gagccagaaggtagggacactgaagaagtttatgtgcaaggtttatcaaccagtctccct
gaagatgtacaaaaagatttattacattctataaaaggtcttgaaaaagctgaaatgatg
cgtacaggatatgctattgaatatgatattgttttaccacatcaattgagagcaacttta
gaaacaaaagttatttctggactttttacagcaggtcaaacaaacggaacttctggttat
gaagaagcagctggtcaaggtattgtggctggtattaacgcagcattaaaggttcaagga
aaacctgaactcattttaaaacgaagtgatgcttatattggggtaatgattgatgacttg
gtaacaaaaggaactttagaaccatatcgtcttttaacttcacgcgcagaatatcgtctt
attttgagacatgataatgctgatatgagacttacagagattggacgtcaagttggttta
gttgatgatgaaagatactcaacctatcaaattaaaaagaataaatttgataatgaaatg
agccgccttgaaaaaataaaaataaaacctgttaaagaaactaatgaaaaagtgaaagca
ttgggatttaaagctttaacagatgctatgactgctaaagaattcatgagaagacctgaa
gttaattatgaagccataacacattttattggtccagcagccgaatatttagatactaaa
atcatcgatttgttagaaactgagattaagtatgaaggctatattaataaagctttagat
caagttgctaaaatgaaacgtatggaagaaaaacggataccatctaatattgattgggat
gcaattgattccattgcaactgaagcccgtcaaaaatttaaaaaaataaatcctgaaacg
attggacaagctagtcgaatctctggtgtcaatccagctgatattagtattttaatggtc
tatctagagggcaataataaggctagaaaaaagtaa
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