Streptococcus urinalis: NCTC13766_00365
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Entry
NCTC13766_00365 CDS
T07856
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
surn
Streptococcus urinalis
Pathway
surn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
surn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NCTC13766_00365 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
surn03400
]
NCTC13766_00365 (recD)
Enzymes [BR:
surn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NCTC13766_00365 (recD)
DNA repair and recombination proteins [BR:
surn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NCTC13766_00365 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
HHH_5
UvrD-helicase
DEAD
RsgA_GTPase
AAA_12
nSTAND3
AAA_22
PIF1
AAA_28
Herpes_Helicase
SLFN-g3_helicase
AAA_14
NPHP3_N
Zeta_toxin
AAA
5_3_exonuc
NTPase_1
T2SSE
AAA_7
UvrD_C
TsaE
ORF6C
AAA_29
ABC_tran
cobW
Motif
Other DBs
NCBI-ProteinID:
VEF31293
LinkDB
All DBs
Position
1:complement(360692..363073)
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AA seq
793 aa
AA seq
DB search
METFFSGTIDRIIFENASNFFKILLLEIDDTDSEFEDIEIMITGTFADIIEGEHYTFWGE
LSQHPKYGEQLKAYRYEKEKPSSSGLIHYFSSDQFKGIGKKTAEKIVNLYGENTIDSILE
APEKLKTISGLSKANRESFIAKLKANYGTEQILAKLAEWGLSNRIALQIFDIYKDDTISR
IEGNPYQLVEDIQGVGFKMADLLAQELGIEADEPQRFLAAIVHSLFELSIDRGDTYVEAR
DLLEYSLNLLEESRNIELNPQLIANELTQLITEEKVHHFDTKVFDNTLYFAEEGIKKNIN
RLLDTPFEISYTDDEIHEELAELEKNLNIQYDTIQKEAILKALKSKVFILTGGPGTGKTT
IINGIIQSYANLNDIDLRKKDIPIILAAPTGRAARRMNELTGIASATIHRHLGLNSDNDF
QTIDDFLDCDLIIVDEFSMVDTWLANQLFSAISSNTQIIIVGDSDQLPSVGPGQVLADLL
KVNTIPSTSLQKIFRQSKDSTIVDLANDVRKGIIPQDFSAKKADRSYFEAQAQHIPTMVS
KIVTSAIKSGIPAHEIQILAPMYRGQAGINNLNTLMQDLLNPLQNQTQFAFNDIHFRKGD
KVLHLVNDIEQNVFNGDIGTITDLIPSKYTESKQDEIFIDFDGTEVIYPRNEWLKLTLAY
AMSIHKSQGSEFQVVILPVTKQSGRLLQRNLIYTAITRSKSKLIMLGEFQAFSYAIQNKN
IRRNTYLVERFQENQVNTLSQKSDHSKNSISSQSQADGLPQNYLLTSDNINTIDPMIGIT
KEDLEQFFNVKNT
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggagacatttttttcaggaactattgaccgcattatttttgaaaatgctagtaatttc
tttaagattttactcctagaaattgacgatactgatagtgagtttgaggatattgaaatt
atgattaccggcacctttgctgatatcatagaaggcgaacactatacattttggggggag
ttgagtcagcatcctaaatatggtgaacagctgaaagcctatcgctatgaaaaagaaaaa
cctagttcatcaggattgatacactacttctccagtgatcaatttaaaggaattggtaaa
aaaacagctgagaaaattgtaaatttgtatggtgaaaataccattgatagcattttggag
gcacctgagaaactaaaaaccatttctggactatctaaagccaatcgcgaaagttttatt
gctaaattaaaagcgaattatggtactgagcaaatcttagccaaactagcagaatgggga
ttgagtaatcgtattgctcttcaaatttttgacatttataaagacgatactatttctcgc
attgaaggaaatccataccagttagttgaagatatccaaggagttggttttaaaatggct
gatttattagctcaagaattaggtattgaagctgatgaacctcaacgatttcttgcagcg
attgttcatagcctttttgagttatccatagaccgtggtgatacttatgtcgaagcgcgt
gacttattagaatattcattaaacctacttgaagaatctcgtaacattgaactcaatcct
caattaattgccaatgaattaacccagttaatcactgaagaaaaagtccatcactttgat
acaaaagtatttgataataccctatattttgctgaagaaggcataaagaaaaacattaac
cgattactagatactccttttgagatttcctatactgatgacgagatccatgaagaatta
gctgaattagaaaaaaatcttaatattcaatacgacactattcaaaaagaagccatttta
aaggccctaaaaagcaaagtctttattttaacgggcggtcctggtactggaaagaccact
atcatcaatggtattatccaaagttatgctaacttgaatgacattgatttaagaaaaaaa
gatatccctatcattttagccgctccaacaggacgtgcagccagacgaatgaatgaattg
acaggaatagcaagtgctacaattcaccgtcatttaggcttaaatagcgacaatgacttc
cagactattgatgattttttagactgtgacttgatcatcgttgatgaattttcaatggtt
gacacttggttagccaatcaacttttttctgctatttcttcgaacactcaaattattatt
gtaggtgatagtgatcaattaccttcagttggtcctggtcaagttcttgctgatttatta
aaagttaatactattccaagtacatcattacaaaaaatttttagacaatcaaaagactct
accatagtggatcttgccaatgacgttcggaaaggaatcattcctcaggatttttcagca
aaaaaagctgatcgttcctactttgaagcccaagctcaacatatcccaacaatggtaagt
aaaattgtaacttcagccataaagagtggtattcctgcacatgaaattcaaattcttgca
ccaatgtatcgaggacaagctggaattaataatctcaatactttaatgcaggatttattg
aatccactccaaaatcaaacacaattcgcttttaatgacattcattttagaaaaggagat
aaagtccttcatttagttaatgatattgaacagaatgtttttaatggtgacattggaacc
attactgatttaattccgtcaaaatacacagaatctaagcaagatgaaatttttatagac
tttgatggtactgaagtaatctatcctcgaaatgaatggctcaaattaaccctcgcttat
gcaatgagtattcataaatcacaagggagtgaattccaagtcgttattttaccagtcacg
aaacaaagtggtcgactccttcaacgcaatcttatctatactgccatcacaagatcaaag
agtaaattaattatgctcggagaattccaagctttctcttatgcgattcaaaacaaaaat
atccgtcgcaatacttatttagttgaaagattccaagaaaatcaagttaatacactatct
caaaaatctgatcattcaaagaattctatttctagtcagtctcaagcagatggtttacct
caaaattatctgcttacatctgataatatcaatactattgacccaatgattgggattaca
aaagaagacttagaacagtttttcaacgttaaaaatacttag
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