Streptococcus urinalis: NCTC13766_00438
Help
Entry
NCTC13766_00438 CDS
T07856
Symbol
cshB
Name
(GenBank) ATP-dependent RNA helicase YqfR
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
surn
Streptococcus urinalis
Brite
KEGG Orthology (KO) [BR:
surn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
surn03019
]
NCTC13766_00438 (cshB)
03009 Ribosome biogenesis [BR:
surn03009
]
NCTC13766_00438 (cshB)
Enzymes [BR:
surn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NCTC13766_00438 (cshB)
Messenger RNA biogenesis [BR:
surn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NCTC13766_00438 (cshB)
Ribosome biogenesis [BR:
surn03009
]
Prokaryotic type
rRNA helicases
NCTC13766_00438 (cshB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
XisI
Motif
Other DBs
NCBI-ProteinID:
VEF31364
LinkDB
All DBs
Position
1:428542..429885
Genome browser
AA seq
447 aa
AA seq
DB search
MSFKDFNFKSYIQKALDEIHFENPTEVQQKLIPIVRSGKDLVGESKTGSGKTHTFLLPIF
EKLDPNSVDVQALITAPSRELATQIYQASKQIADHSEEEIRVVNYVGGTDKLRQIEKLKT
SQPHLVIGTPGRIYDLVKSGDLEIYKANTFVVDEADMTLDMGFLDTVDKMASRLPKDVQM
LVFSATIPQKLQPFLKKYLSNPVVEQIKTKTIISDTIDNWLLSTKGRDKNAQILEVVQQL
QPYLAMIFVNTKERADELHHYLISNGLKVAKIHGGVPPRERKRIMNQVKKLDFEYIVATD
LAARGIDIEGVSHVINDAIPQDLSFFVHRVGRTGRNGLSGTAITLYQPSDDSDIKELEKL
GIHFIPKQLKNGEFIDTYDRDRRLTREKSYEKLDTEMIGLVKKKKKKIKPGYKKKIQWKV
DEKRRKERRAANRAKSRAERKAKKQTY
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtcattcaaagattttaattttaaatcctatattcagaaggcgcttgatgaaattcat
ttcgaaaatccaactgaggtgcaacaaaaattaattccgatagttcgttctggtaaagat
ttggttggagaatcaaaaactggctcaggaaaaactcatacgtttttgttacctattttt
gaaaaattagatcctaattctgtagatgttcaagcactaatcactgctccaagtagagaa
ttagccacacaaatctatcaggcatcaaaacaaattgctgatcactctgaagaagaaatt
agggttgttaattatgtaggtggtacagacaaacttcgtcaaattgagaagttaaaaaca
tcacagccacatcttgtaatcgggacacctggtcgcatttatgatttagtcaaatcaggt
gatttagaaatttacaaagcaaacacatttgttgttgatgaagctgatatgacactagat
atgggatttcttgatactgttgataaaatggcatctcgtctacccaaagatgtccaaatg
ttagttttttcagctaccattccacaaaaattacaaccattcttaaaaaagtatctctca
aatccagtcgttgaacaaattaaaacaaagactattatttcggatacaatagataattgg
ttattatcaactaaaggtcgcgataaaaatgctcaaattctagaagtagttcaacaatta
caaccttatttagcgatgatttttgttaataccaaagaaagagctgatgaactgcatcat
tatttaatttcaaatggtttaaaagtagctaagattcatggaggtgtaccaccacgggag
cgtaaacgtattatgaatcaagtgaaaaaacttgattttgagtacattgtagccacagat
ttagctgctagaggtatcgatattgaaggtgttagtcatgtcatcaatgatgccattcca
caagatttgtccttctttgttcatagagttggaagaacaggtagaaatgggttatccgga
acagccataacgctttatcaaccaagtgatgactcagatatcaaagaacttgaaaagctt
ggcattcattttatccctaaacaattaaaaaatggggaatttattgatacttatgaccga
gatcgaagactcacacgtgaaaaatcatatgaaaaattagatactgaaatgatcggtttg
gttaaaaagaaaaagaaaaaaattaaacctggttataaaaagaaaattcagtggaaagtt
gatgaaaagcgtcgtaaagaaagacgtgccgccaaccgagcaaaaagtcgtgcagaaaga
aaagcaaaaaaacaaacatactaa
DBGET
integrated database retrieval system
