Streptococcus urinalis: NCTC13766_00562
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Entry
NCTC13766_00562 CDS
T07856
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
surn
Streptococcus urinalis
Pathway
surn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
surn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NCTC13766_00562 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
surn03400
]
NCTC13766_00562 (xseA)
Enzymes [BR:
surn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
NCTC13766_00562 (xseA)
DNA repair and recombination proteins [BR:
surn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
NCTC13766_00562 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
CtIP_N
RMI2
Fe-ADH
RecJ_OB
DUF7117
FIST_C
Motif
Other DBs
NCBI-ProteinID:
VEF31473
LinkDB
All DBs
Position
1:536855..538186
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AA seq
443 aa
AA seq
DB search
MPDYLTVSHLTKYLKLKFERDPYLERVYLSGQVSNFRRRPNHQYFSLKDENAVIQATMWG
SSYKKLCFDLEEGMKINVVGRVQLYEPGGSYSIIIESAQPDGIGALAVQFEQLKKKLTQA
GYFLEQHKQQLPQFVSKVGVVTSSSGAVIRDIITTISRRFSGVEIILYPTKVQGQGAAEE
IVKNIRRANERQDLDVLIIGRGGGSIEDLWAFNEEIVVEAIFESRLPIISSVGHETDTTL
SDFVADKRAATPTAAAELATPVTKSDLLTWLSERQNRSFQAVLRQITIHRERTTQLSNSV
IFRQPMRLYDAYIQKLDQLSLSLNQSLKNQVQTASQNINYLDRRLKAINPQQGLVNFQDK
LRQNQKLLMSNMTSLYDTKLARFEKAQDTLLSLDTGRIVSRGYAIIKQNEQIISSTKQIK
QGDHLMIEMKDGHIKVEVEDVNN
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgccagattatttaactgttagtcacctcacaaaatatctaaaattaaagtttgaaaga
gacccatatttagaaagggtctatctatcaggtcaagtttcgaactttcgaagacgacca
aatcatcagtatttttctcttaaagatgagaatgctgttattcaagcgacaatgtggggt
tcttcttataaaaaattatgttttgatttagaagaaggcatgaaaatcaatgttgttggc
cgtgtgcaattatatgagcctggtggttcttattcaattattattgaaagtgcgcagcca
gatggcataggtgctttagctgtccagtttgaacaacttaagaagaaattaacacaagct
ggttactttttagaacagcacaagcaacaattaccacagtttgtctcaaaagttggcgtt
gttacaagttcaagtggagcagttattagagatattattaccacaatttcaagaagattt
tcaggagttgaaattatcctttatccgaccaaagttcaaggtcaaggtgctgctgaagaa
attgtgaaaaatattagacgagctaacgaaagacaagacttagatgttttaattattggt
cgtgggggtggctccattgaagatttatgggcatttaatgaggaaattgttgttgaagct
atttttgagtcaaggttaccaattatctcaagtgttggacatgaaacagacacaacgcta
tcagattttgtagctgataaaagagcagcaacaccaactgctgcagcagaattggcaaca
ccagttacaaaaagtgatttattaacttggctttcagaaaggcaaaataggtcatttcaa
gctgtattgcgacagataacgattcatagagaaagaacaacccaactttcaaattcagta
atttttaggcaacctatgcgactttatgatgcttatattcaaaaattagatcaattaagt
ttatcattaaatcaaagtttaaaaaatcaggttcagacagcatcacaaaacataaactat
ttagatagaagattaaaagcaattaatccacaacaaggtttagtcaattttcaagataag
ttaagacaaaatcagaaattgttgatgtcaaatatgactagcctatatgatactaaattg
gcaagatttgaaaaggctcaggatacgttgctttctctagatacaggtcgtattgtttca
aggggctatgctatcattaaacaaaacgaacaaataatttcaagtacaaaacaaattaaa
caaggtgatcatttgatgatagaaatgaaagatggtcacattaaagtagaggtagaagat
gtcaacaactaa
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