Streptococcus urinalis: NCTC13766_00654
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Entry
NCTC13766_00654 CDS
T07856
Symbol
rlmCD_2
Name
(GenBank) tRNA (uracil-5-)-methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
surn
Streptococcus urinalis
Brite
KEGG Orthology (KO) [BR:
surn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
surn03009
]
NCTC13766_00654 (rlmCD_2)
Enzymes [BR:
surn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
NCTC13766_00654 (rlmCD_2)
Ribosome biogenesis [BR:
surn03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NCTC13766_00654 (rlmCD_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_15
TRM5-TYW2_MTfase
N6_N4_Mtase
Cons_hypoth95
DOT1
Methyltransf_25
MTS
RrnaAD
PrmA
IF2_N
PCMT
Motif
Other DBs
NCBI-ProteinID:
VEF31564
LinkDB
All DBs
Position
1:625772..627406
Genome browser
AA seq
544 aa
AA seq
DB search
MLTKNDIVQVEISDLSHDGSGVAKIDGFVFFVENALPGELVKMRVLKVKKQIGFGKVEEY
LSKSPYRNEHLDNTYLRTGIADFGHLDYAQQLVFKQKQVIDNLYKIAGISNVSVNQTLGM
EKPYAYRNKAQVPVRRVNGQLETGFFRKNSHDLVPIDDFYIQDKAIDQLISFVRDLLRRY
DLKPYDENEGTGLIRHIVVRKGHYSNQMMLVLVTTRPKIFRIYQILEKLVSQFPNLVSII
QNINDKKTNAIFGQEFKTLYGKDTITDSMLGNNYIISAQSFYQVNTEMAEKLYQTAIDFS
DLNENDIVIDAYSGIGTIGLSFAKKVKAVYGVEVIETAVKDARENAKQNAISNAFYTVGT
AEEAMAQWSKVGIKPSVILVDPPRKGLTESFIKASVAMEPQKITYVSCNPATMARDIALY
QTLGYQLKKVQPVDLFPQTHHVETVCLLTRKNVAGYVNVDIDVKELKKDKLPPKPTYKQI
QAYVLEKYGMKVSTLNIATVKDELGLEKQFSWKEDGMAAKNRPQCPKEKHDAIVDAFRHF
NMTP
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgttaacaaaaaatgatattgtccaagttgaaatttctgatttaagccatgatggttct
ggagtagcgaaaattgatggttttgttttctttgtcgaaaatgctcttccaggtgaattg
gtaaaaatgagagttttaaaagtaaagaagcaaattggttttggtaaagtagaagaatac
ttaagtaaatcaccttatcgcaatgaacatcttgataatacctatttaagaacaggtatt
gctgattttgggcatcttgactatgctcaacagctagtttttaagcaaaaacaagtgatt
gacaatttatataagatagctggaatttcaaatgtttccgttaatcaaacacttggtatg
gaaaaaccttatgcctaccgtaataaagctcaagttcccgtcagaagagtcaatggtcaa
ctggaaacaggcttctttagaaaaaattctcatgatttagttccaattgatgatttttac
atacaagataaggctatagatcaattaatttccttcgtccgtgatcttttaagacgatat
gaccttaaaccttatgatgaaaatgaaggaacaggattgatccgtcacatagttgttcga
aaagggcactattctaatcaaatgatgttggtcttagtaacgacgagaccaaagattttt
agaatttatcaaatccttgaaaaattagttagtcaatttccaaatttggtttctattatc
caaaacataaatgataaaaaaacaaatgcaatttttggtcaagagtttaaaaccttatat
ggaaaagatacaatcacagatagcatgttagggaataactacatcatttcagctcaatca
ttttatcaagtgaatactgaaatggctgaaaaactctatcaaacagcaattgacttttcg
gatttgaatgaaaatgatattgttattgatgcctattcagggattgggacaattggatta
tcgttcgcaaaaaaagtcaaggctgtatacggtgttgaagtgattgaaacagctgtaaaa
gatgctagggagaatgcgaaacaaaatgcgatttcaaatgccttttacactgtaggaaca
gcagaagaagctatggcacagtggtccaaagtgggaataaaaccaagtgttatactagtt
gacccacctcgaaagggactgactgaaagtttcatcaaagccagtgttgctatggaaccg
caaaagataacttatgtttcttgtaatccagcaacgatggcgcgtgatatcgctctttat
caaacgttaggatatcagttgaaaaaagttcaacctgtcgatttatttccacaaacacat
catgtcgagacggtctgtttactaacccgaaaaaatgtcgcagggtatgtgaacgttgat
atagacgtgaaagagttaaagaaagacaagctcccacctaagccaacgtacaaacaaata
caagcatatgtgcttgagaaatacggtatgaaggtatcgacgctgaatatcgcgactgtt
aaggatgaattagggcttgagaagcagttttcgtggaaagaagacgggatggctgctaaa
aatcgacctcaatgcccgaaggaaaagcacgatgcgatagtggatgcgttcagacatttc
aatatgacgccgtaa
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