Streptococcus urinalis: NCTC13766_01165
Help
Entry
NCTC13766_01165 CDS
T07856
Symbol
ssp5
Name
(GenBank) Agglutinin receptor
Organism
surn
Streptococcus urinalis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AgI_II_C2
Antigen_C
GbpC
Adhesin_P1_N
Gram_pos_anchor
DUF5884
PRIMA1
DUF7233
Motif
Other DBs
NCBI-ProteinID:
VEF32063
LinkDB
All DBs
Position
1:complement(1091037..1095941)
Genome browser
AA seq
1634 aa
AA seq
DB search
MTKQCHHHFLVNQEKAEKHVFRKSKKYRTLCSVALVTMVTAVVAWGGQVAQADEVVTSSQ
GKTVQLTENPATNLPEAQPTPVAEQTNSLASTGQSDGAITVTVPHDVVTQAVNQATAEGV
TTVQDQPMDLGNTTSASETSKQLDKAEADAARQAEAITQLTNTYKADKATYEQDKTRVEQ
GNAALAASHKDATQAGKALNHSVDSTVSKIKDQDQSANVTVTTQTVTSGDGSTVSGYQDY
TSAVAAIDKQNKDNLSEYESKKKDADAIVAKNLLIQKANEDGVAKAKADTEAIDKRNQAG
QKAVDDENKAGQAAVDAYNKDQQKLVTDREAEIAAITKSNKEKEEAAKKENAAIDAYNTK
EMERYKRDLAEISKGEEGYISQALAQALNLNNGEPQARHSADTRNPNRIVAKGDAMLGGY
SKILDSTGFFVYDTFKTGETLSFTYQNLQNARFDGKKITKVAYDITNLVSPTGTNAVQLV
VPNDPTEGFIAYRNDGTGNWRTDKMEFRVKAKYFLEDGSQVSFTKEKPGVFTHSSLNHND
IGLEYVKDSSGKFVPINGSTIQVTNEGLARSLGSNRASDLKLPEEWDTSYSNYAYKGAIV
STVTSGNTYTVTFGQGDMPQNVGLSYWFALNTLPVARTVKPYSPKPHVTPKLEPIPEPIK
VVPKTFTPKTFTPEPPVSFKEKPLEKVTQPSLTLTKVTLPKDPTPEPLPKAPQVPTIHYH
DYRLTTTPEIVKEVINTDQVNLHDKTVAKDSTVIYPLTVDAFSPNRAKTTSLTFEDYLPA
GYAFDKEKTQAENGNYTLTFDAAKNFVTLTAKEALLQEVNQDLTKSYQLEAPKLYGSLQN
DGATYSNSYKLLINKGTPNAYTVTSNVVTVRTPGDGTTTSRIEPQKKNENEDGVVINDTV
VALGTTNHYRLTWDLDQYKGDRSSKETIARGFFFVDDYPEEVLNLVDQGTSITTPEGKDV
SGITVKAYASLSEAPKDLQDKLAHAKISPKGAFQVFMPNDNQAFYDQYVITGTSLNLVTK
MTVKDSLYGQTKTYRNKAYQVDFGNGYETDEVTNTLVSPTPKKQNLNKGKVDINGKPMVV
GSQNHYTLSWDLDQYRGIKADKAQIAQGFYFVDDYPEEALLPDETSIQLVTIDGKAVSGV
TVKTYTSLSEAPKPLQAALSKRKIVPKGAFQVFMAEDPQAFYDSYVTQGQNITIITPMTV
RESMLNSGKSYDNVAYQVDFGQAYETNTVTNHVPKVTPHKTNTNKEGVSIDGKTVLPNTV
NYYKIVLDYSQYKDLVVTEDVLAKGFYMVDDYPEEALSLNADGIQVMDKAGNLVKGISVK
AYASLSEAPKVVQDAMAKRQFTPKGAILVLSADDPKAFYEAYVKTGQTLVVTLPMTIKNE
LTKTGGKYENTAYQIDFGLAYVTETVVNNVPKLDPQKDVVIDLPQKENSLDGKEVALNQV
FNYRLVGALIPGNRATPLIEYRFDDDYDESHDDYNGVYKAYTLVDVTLKDGMVLPKGTEV
TKYTLQHVDTSKGTVTISFDQEFLEKLAEESEFQADVYVQMKRIASGEVENTVLHTVNGY
TISSNTVKTTTPEPEPPTPTQPTPPQPPIPTQEPPVPASVLPNTGESQSLLALVGGGLLL
GLAYGLSKRKMEDN
NT seq
4905 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaacaatgtcatcatcactttttagttaatcaggaaaaagcagaaaagcatgtc
ttccgtaaaagtaagaagtatcggacactttgttcggtagctcttgtaaccatggtgaca
gctgttgtcgcttggggtggccaagtagcacaagctgacgaagtggtaacatcctcacaa
ggtaaaaccgttcagttgacagaaaatcctgcgacaaatttaccagaagctcagccaact
ccagttgctgaacaaacgaatagtcttgcgtcaactggtcaatcagatggggctattaca
gtcaccgttcctcatgatgttgtgacacaggctgtcaatcaagcaactgctgaaggagtt
actactgttcaagaccaacctatggacttgggaaatacaacttctgcgagtgagaccagt
aagcaattagataaagcggaagcggatgctgctaggcaggctgaagccattactcagcta
accaatacctataaagctgacaaagcgacttatgaacaagataaaacacgtgttgaacaa
gggaatgctgcgttggctgctagtcataaagacgccactcaagcaggaaaagccttgaat
cattcagtggatagcacagtttcaaaaatcaaagaccaagatcagtcggctaatgtgacc
gttacaactcaaaccgtaacatcaggagatggttcaacggtttcaggctatcaggattat
acctctgcggtagctgctattgataagcaaaataaggacaatctatctgaatacgaatca
aagaaaaaagatgcagatgccattgtcgcaaagaatctcttaatccaaaaggcaaatgag
gacggggttgccaaggcaaaggctgatactgaagcaattgataaacgcaatcaagctgga
caaaaagcagtggatgatgaaaacaaggcaggtcaagctgctgttgatgcctacaataaa
gaccaacagaaattggtgacagaccgtgaagctgagattgctgctatcacgaaaagcaat
aaggaaaaagaagaagcagccaagaaagaaaatgctgccattgatgcctataacaccaag
gaaatggagcgctataaacgtgacttagctgagatttcaaaaggtgaggaaggctacatc
tcacaagctcttgctcaggctttaaatttgaataatggagaaccacaagcacgccattca
gctgataccagaaatcctaatcgtatcgttgctaagggtgacgctatgcttggtgggtat
tctaaaatccttgattcgacaggattctttgtctatgacacctttaaaacaggagaaacc
ctttcctttacctatcaaaatcttcaaaatgctcgctttgatggtaagaaaatcacaaaa
gtagcctatgacattacaaaccttgtttctccaactggaactaatgccgtgcagttagtc
gtgccaaatgacccaacagaaggctttatcgcctaccgtaatgatgggacaggcaattgg
cgaacagacaagatggagtttcgtgtcaaggccaagtatttcttagaagatggctcacaa
gtcagcttcaccaaggaaaaaccaggtgtctttactcattcctcactcaaccacaatgac
atcggtttagagtatgtgaaagactcatcaggcaagtttgtccctatcaatggctcaacc
attcaagtgactaacgaaggtttggctcgttcactcgggtcaaaccgtgccagtgatttg
aagcttcctgaagaatgggatacgtcatatagtaattatgcctataagggagcaattgtc
tcaacggttacatcaggcaacacctatacggtgacctttggtcaaggagatatgccccaa
aatgttggtctctcttattggtttgccttaaacaccctaccagttgcacggacggttaaa
ccttatagtccaaaacctcatgtgacaccaaagttagagccaattccagaaccgattaag
gttgtgccaaaaacctttaccccaaagacttttaccccagagccacctgtgagctttaag
gaaaaaccattagagaaagttactcagcctagcctaacacttaccaaggtcaccttgcct
aaagaccctacgccagagccgttaccaaaagcaccacaagtgccaacgattcattaccac
gactatcgtctgacaacgactcctgaaattgttaaggaagttatcaataccgaccaagtg
aaccttcatgacaaaacggtcgcaaaagattcaacggtcatttatcccttaaccgtagat
gctttttctccaaatcgagccaaaaccactagcctcacctttgaagattaccttccggca
ggttatgcctttgataaagaaaaaacgcaggcagaaaacggaaattatacccttaccttt
gatgctgctaagaactttgtgaccttgaccgcaaaggaagccttgcttcaagaggtcaac
caagaccttaccaaatcttatcaactggaggctcctaaactttatggtagccttcaaaat
gatggagcaacctattccaacagttataagcttctcatcaataagggaactccaaatgcc
tatacagtgacttccaatgtcgtgacggtgcgaacgcctggtgatggaacgaccactagc
cgtattgagccgcagaagaaaaatgaaaatgaagacggtgtggttattaacgatacggta
gtggctctaggaacaactaatcattaccgtttgacctgggatttagatcaatataaaggc
gataggtcttctaaagagacgattgctcgtggtttcttctttgtagatgattacccagag
gaagtgttgaatttagtagaccagggaacaagtatcaccactcctgaaggcaaagacgta
tcagggattactgtcaaggcttatgcgtcgctgtcagaagctcctaaagaccttcaagat
aaactcgctcatgccaagatttctcctaaaggagctttccaagtctttatgcctaatgac
aatcaggctttttatgaccagtatgttataacaggaacctctttgaaccttgtcaccaaa
atgacggtcaaagatagtctttatggtcagacgaagacttatcgaaacaaagcctaccaa
gtggattttggcaatggctatgaaaccgatgaggtgacgaatacccttgtgagcccaaca
ccaaaaaaacaaaacctaaataagggtaaggtggatatcaatggcaaacctatggtagtc
ggttcacaaaaccactataccttgtcatgggacttggaccaataccgtggcattaaagcc
gataaggctcaaattgcacaagggttttactttgtggatgattatcccgaagaagctcta
ttaccagatgaaacaagtattcaacttgtgacaattgatggtaaagcagtgtcaggtgtg
acggtaaaaacttatacgagcttatcagaagcccctaaacccctacaagcagccctttca
aaacgcaagattgtgcctaaaggagccttccaagtctttatggcagaagatccgcaagcc
ttctacgattcttatgtcacgcaaggtcaaaacatcaccatcatcacccctatgactgtc
cgtgagtctatgcttaattcaggaaagtcttatgacaatgtagcttatcaagtagacttt
ggacaagcctatgaaaccaatacggtaaccaatcacgtgccaaaagtaacaccacataaa
actaataccaataaagaaggcgtgtctattgatgggaagaccgttcttccaaataccgtt
aattactacaaaattgttctggattacagtcagtacaaggacttggtggtgacggaggat
gttcttgccaaaggtttttacatggtggatgattaccctgaagaagcgcttagcctcaat
gcagatggtatccaagtgatggataaggcaggaaatcttgtcaaagggatttcggtgaaa
gcctatgcctcattgtcagaagcgcctaaagtggttcaagacgctatggccaaacgtcag
ttcacaccaaaaggagccattctagttttaagcgctgatgatccaaaagcgttctatgag
gcttatgttaaaactggtcaaaccttagtggtgacccttccaatgactattaagaatgag
ctgacgaaaactggtgggaagtatgaaaacaccgcttatcagattgactttggtttggct
tatgtgacagagactgtggttaataatgtgccaaaactagacccacaaaaagatgtggtg
attgatttgccacaaaaggagaacagtcttgatggaaaagaagttgccttgaatcaggtc
tttaactaccgtttggtgggagcactcattccaggtaatcgtgcgacaccactcatcgaa
taccgctttgacgatgattacgatgaaagccatgacgactataatggtgtttacaaggct
tataccttagtagatgtgactctaaaagatggaatggttttaccaaaagggacagaagtg
accaagtacacgctacaacatgtcgacacgtcaaaagggacagttaccattagttttgat
caggaattccttgaaaaactagcagaagaatctgagtttcaggcagatgtttacgtgcaa
atgaaacgaatcgcttcaggtgaagtagaaaataccgtattacatactgtcaatggctac
accatcagttcaaacacggttaaaacaactactcctgaaccagagccaccaactccgact
caaccaaccccaccccaaccacctattccaacacaagaaccaccagttccagcaagtgtc
ttaccaaatacaggagagagtcaatccctcttggcactggttggtggaggacttctttta
ggcctagcttacggactttctaaacgcaaaatggaggacaactaa
DBGET
integrated database retrieval system
