Streptococcus urinalis: NCTC13766_01271
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Entry
NCTC13766_01271 CDS
T07856
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
surn
Streptococcus urinalis
Pathway
surn03030
DNA replication
surn03430
Mismatch repair
surn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
surn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC13766_01271 (dnaE)
03430 Mismatch repair
NCTC13766_01271 (dnaE)
03440 Homologous recombination
NCTC13766_01271 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
surn03032
]
NCTC13766_01271 (dnaE)
03400 DNA repair and recombination proteins [BR:
surn03400
]
NCTC13766_01271 (dnaE)
Enzymes [BR:
surn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC13766_01271 (dnaE)
DNA replication proteins [BR:
surn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC13766_01271 (dnaE)
DNA repair and recombination proteins [BR:
surn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC13766_01271 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
VEF32167
LinkDB
All DBs
Position
1:complement(1188503..1191607)
Genome browser
AA seq
1034 aa
AA seq
DB search
MIAQLDTKTVYSFMESLIDIDHYILESKKLGYEAIGIMDKDNLYAAYHFIEKANAANLKP
ILGLELGLTYRDQTYDLYLIALNTNGYQNLLKLSSLQMSNALTFEKFLDFKENLAIIINY
YSGIEELTLPFDFYIGVCEDSPILQTQKKLIPIHTVRYFNQDDTESLQVLKAIKENTLLR
ETSSIDNHQFLLSKANLQAKFEQKFPNALETLNTLVATINYQFDKSLKLPRFNREIPAKD
QLRQLTEKGLKQKNLWQKDYQERLSEELGIISKMGFDDYFLIVWDLLRFGREKGYYMGMG
RGSAAGSLVAFSLDITGIDPVKNDLLFERFLNEERFTMPDIDIDLPDIYRSDFLHYVRDK
YGSQHAAQIVTFSTFGAKQALRDVLKRFGIPEYELSQFTKKIGFKDDLNQVYEKNIAFKQ
LINSKLEYQKAFQVAKRIEGNPRQTSIHAAGIVMSDDNLTDHIPLKMGDEMMITQYDAPA
VEAVGLLKMDFLGLRNLTLIQKMKEKLLDDKGISIKIEDINLEDKETLTMFANGDTRGIF
QFEQNGAIQLLKRIKPSSFEEVVATTSLNRPGASDYIDNFVNRKFGHEKIDLLDPSIASI
LESTYGIMLYQEQVMQIAQVFAGFTLGKADLLRRAMSKKNLAEMKKMEDSFIKGAIANHH
DEAKAIDLFDRMVKFAGYGFNRSHAFAYSALAFQMTYFKAHYPDIFYDIMLNYANGDYLT
DAINSGFKIAKMNINTIPFTDKIKHNQIYLGLKQIKNQPRDFSYWIIENRPFRHIEDFLT
RLPEKYQQKELILPLVKIGLFDQFEKNRRKIEENLNGLIIFVQELGSLFADSSFSWVECQ
DYNEAEKFQAEVEVLGVGVSPHPLLKIASLKGNKATSISQLTVNKVETILVEIQSIRLIR
TKTNGQQMAFLSVSDLKNKCDVTIFPETYYQVKHLLKEGQYYYLEGKIQERDGRLQMILN
KASIATSETFWILAESHLNDNKISSILENYKGNIPVIIHYQDTKETIQSQVHFIEKSEYL
QKKLKQFTLKTVFQ
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgattgcccaattagatactaaaacggtttattcgtttatggaaagtttgattgatatt
gatcattatatattagaatcaaagaagcttggttatgaagctattggtatcatggataaa
gacaatctttacgcagcatatcattttatcgaaaaagcaaatgcggcaaatttaaaaccc
attcttggtttagaactaggattaacctatcgtgatcagacttatgacctttatctgatt
gctttaaatactaatggctaccaaaatctcttaaaactttctagtttacagatgtctaat
gctttaacttttgaaaagtttcttgattttaaagaaaatctagctattattattaactat
tattctggtattgaagaattgacacttccttttgatttttatattggtgtttgcgaagac
tctccgatacttcagactcaaaagaaattaatacctattcacactgtaaggtatttcaat
caagatgatactgaaagtctacaagttttaaaagctatcaaagaaaatactttactaaga
gaaactagttctattgataatcatcaatttcttttatccaaggctaatttgcaagctaag
tttgaacagaaattcccaaatgctcttgagactttaaatacgttagtagcaactattaat
tatcagtttgataagtctttaaaattaccgagatttaatagagaaattccagcaaaagac
caattgcgtcagttaactgaaaaaggcttaaaacaaaaaaacttatggcaaaaagattac
caagaaagacttagcgaagaacttggaatcatttcaaaaatgggttttgatgattatttt
ttgattgtttgggatttactaagatttggccgtgaaaaaggttattatatggggatggga
cgtggatctgccgcaggaagtttagtagctttttcactagatatcacaggaattgatccc
gtcaaaaatgatttgctttttgaacgctttttaaatgaagaacgttttacaatgccagat
attgatattgaccttcctgatatttatcgaagtgattttcttcattatgtgagagataaa
tatggtagtcaacatgctgctcaaattgttactttttctacttttggtgccaaacaagct
ttaagagatgttttgaaacgatttggtattccagaatatgaattgtctcaatttaccaaa
aaaattggctttaaagatgatttaaaccaagtttatgaaaaaaacattgcctttaaacaa
ttaataaattcaaaattagaatatcaaaaagcatttcaagttgctaaaagaattgaaggt
aatcctagacagacctcgattcatgctgcaggtattgtcatgtcagatgataatttgaca
gatcatattcctctaaaaatgggtgatgaaatgatgatcactcaatatgatgctccagca
gttgaagcagttgggcttttgaaaatggattttttaggtcttagaaacctgacattgatt
caaaagatgaaagaaaagcttttagatgacaaaggcatttcaataaagattgaagatatc
aatttagaagacaaagaaacattaaccatgtttgcaaatggtgatacaagaggaattttt
caattcgaacaaaacggagcaatacaacttttgaaacgtattaaaccttctagttttgag
gaagttgtcgctacaacaagtttaaatagaccaggtgctagtgattatattgataatttt
gttaatcgtaaatttggtcacgaaaaaattgatttacttgatccgtctattgcaagtatt
ttagagtcgacctatggcattatgctttatcaagagcaagtgatgcagattgcacaggta
tttgctggttttactttaggtaaagcagatttgctaagaagagcaatgtctaaaaagaat
ctagcagaaatgaaaaaaatggaagattcctttattaaaggtgcaattgctaatcaccat
gatgaagccaaagctattgatttatttgatagaatggttaaatttgccggttatgggttt
aacaggagtcatgcctttgcttattctgctttagcttttcaaatgacttatttcaaagca
cattatcctgatattttttatgatatcatgcttaattatgctaatggtgattacctaaca
gatgctattaattcaggttttaagattgcaaaaatgaatattaatacgattccatttaca
gataaaattaagcataaccaaatctatttaggattaaaacaaataaaaaatcaacctaga
gatttttcatattggattatagaaaatagaccttttcgacatattgaagatttcttgaca
cgtttacctgaaaaataccaacaaaaagaacttattctaccattagtaaaaattggtctt
tttgatcaatttgaaaaaaatcgtcgaaaaattgaagaaaacctaaatggcttgattatt
tttgtacaagaattaggtagtttatttgcagattcttcgtttagttgggtggaatgtcaa
gattataacgaagctgaaaaatttcaagcagaagtagaagtcttaggcgtaggagttagt
cctcatcctttactaaagattgctagtttaaaaggaaataaagcaacttctatttcccaa
ttgacagttaataaagttgaaacaattttggtagaaattcaatccatacgattaatccga
actaagacaaatggacaacaaatggcctttttatcagttagtgatttaaaaaataaatgt
gatgtaactatttttccagaaacctattatcaagtaaaacatcttttaaaagaaggacaa
tattactatttagaaggaaaaattcaagaaagagatggacgtctccaaatgattctaaat
aaagcatctattgccacaagtgaaaccttctggattcttgctgaatcgcatcttaatgat
aataaaatttctagtattttagagaattataaaggcaatataccagttattattcattat
caagataccaaagaaacaatccaaagtcaggtgcattttattgaaaaatcggagtattta
cagaaaaaattaaaacaatttacattgaaaacggtttttcagtaa
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