Streptococcus urinalis: NCTC13766_01782
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Entry
NCTC13766_01782 CDS
T07856
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
surn
Streptococcus urinalis
Pathway
surn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
surn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC13766_01782 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
surn03400
]
NCTC13766_01782 (uvrA)
DNA repair and recombination proteins [BR:
surn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC13766_01782 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NCTC13766_01782 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
AAA_29
RsgA_GTPase
nSTAND1
AAA_21
AAA_23
AAA_22
BCA_ABC_TP_C
AAA_33
nSTAND3
AAA_18
NACHT
AAA_14
Viral_helicase1
SLFN-g3_helicase
NB-ARC
DUF87
DnaJ_CXXCXGXG
MMR_HSR1
cobW
NTPase_1
PRK
DUF463
Septin
MeaB
T2SSE
PapD_C
Motif
Other DBs
NCBI-ProteinID:
VEF32667
LinkDB
All DBs
Position
1:complement(1672820..1675642)
Genome browser
AA seq
940 aa
AA seq
DB search
MQDKLTIRGARAHNLKNIDVEIPRDKLVVVTGLSGSGKSSLAFDTIYAEGQRRYVESLSA
YARQFLGNVEKTDVDSIDGLSPAISIDQKTTSKNPRSTVGTVTEINDYLRLFYARVGTPY
CIHGHGPITASSVEQIVDNVLQLPERTRMQILAPIVRRKKGQHKTIFEKIQKDGYVRVRV
DGDIFDVAEVPELSKTKMHNIGVVVDRLVNKDGIRSRLFDSIEAALRLGDGYVIIDTMDG
NELLFSEHYACPVCGFTVPELEPRLFSFNAPFGSCPTCDGLGMNLEVDKDLVVPDPSKTL
REGAIAPWNPISSNYYPQMLEQAMLHFGIDMDRPYEELSEEDQDLILNGSDGKEFHFHYI
NDFGGERDIDIPFEGILTNINRRYHETNSDFTRNVMRGYMNELVCPECHGYRLNEQALSV
KIGGEKGLNIGQLSELSIADHLEWLNQLQLTDNENTIAKPIVKEIGDRLTFLNNVGLNYL
TLSRAAGTLSGGESQRIRLATQIGSNLSGVLYVLDEPSIGLHQRDNDRLIESLKKMRDLG
NTLIVVEHDEDTMMQADWLIDVGPGAGAFGGEIIASGTPKQVSKVKKSITGQYLSGKKAI
PVPEERRKGNGRFIELKGASEHNLQSVDVKFPLGKFIAVTGVSGSGKSTLVNSILKKVIA
QKLNRNSEKPGKYKSITGIEHLDRLIDIDQSPIGRTPRSNPATYTGVFDDIRDLFAQTNE
AKIRGYKKGRFSFNVKGGRCEACSGDGIIKIEMHFLPDVYVPCEVCHGTRYNSGTLEVRY
KDKNISEVLDMTVSDALEFFASIPKIARKIQTIKDVGLGYVTLGQPATTLSGGEAQRMKL
ASELHKRSTGKSFYILDEPTTGLHTDDIARLLKVLERFVDDGNTVLVIEHNLDVIKSADH
IIDLGPEGGVGGGTIIATGTPEEVAKNPDSFTGHYLKMKL
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgcaagataaattaaccattcgtggggccagagcccataatttaaaaaatattgatgtc
gaaattcccagagataaattggttgttgtgacaggtttgtcagggtctggaaaatctagc
ttagcctttgacaccatctatgccgaaggacaaagacgttatgttgagagtttgtcagcc
tatgctagacaatttttaggtaatgttgaaaaaacagacgttgattcgatagatggctta
agtccagccatctctattgaccaaaaaacaactagtaaaaatcctagatcaacagttgga
acggttactgagattaatgactatctcagactcttttatgcgcgtgtaggaacaccatac
tgtattcatggtcatggtccgattacggcatcttctgtagagcaaatcgtggataatgtc
ctacaacttccagaacgaacaagaatgcaaattcttgccccgatcgttagaagaaaaaaa
ggacaacacaaaacgatttttgaaaaaattcaaaaagatggctatgtcagagttcgtgtc
gatggtgatatttttgatgtcgctgaagttccagaactttctaaaaccaagatgcataat
attggagtcgttgttgaccgacttgtcaataaagatgggattagaagtcgtctttttgat
tccatcgaagctgcattaagacttggtgatggttatgtgattattgacaccatggatggc
aatgaactgttattttctgagcattatgcttgtccagtttgtggttttacagttccagaa
ttggaaccaagactattctctttcaatgcaccatttgggtcttgtccaacttgtgatggt
ttagggatgaatctagaagtggataaggatttagttgtaccagatccgtcaaaaacactt
agagaaggggctattgcaccttggaatccaatctcatcaaattattatcctcaaatgcta
gagcaagccatgcttcattttggaatagatatggataggccatacgaagaattgagtgaa
gaagaccaagaccttattttaaatggttctgatggaaaagaatttcattttcactacatt
aatgattttggtggagaacgcgatattgacattccatttgaaggtattctgacaaatatt
aatcgtcgttatcatgaaacaaatagtgatttcactagaaacgtgatgcgtggttacatg
aatgaattggtttgtccagaatgtcatgggtatcgcttaaatgaacaagcactctctgta
aaaattggtggtgaaaaaggtctaaacattggtcaactctctgaattatcaatcgctgat
cacttggaatggttaaatcaattacaactgacagataatgaaaacacgattgcaaaacca
attgttaaagaaattggagaccgcttaacattcttaaataatgttggcttaaattacctc
actctatcacgcgcagctggaacattgtctggtggtgaaagccaacgtattagactagca
acgcaaattggatcaaacttatcaggtgttctttatgtactggatgaaccatctattgga
ctgcatcaaagggataatgatcgtttaattgagagtcttaagaagatgcgtgacttagga
aacaccttaatcgtggttgaacatgatgaggacacaatgatgcaagctgattggttaatt
gatgttggacctggtgccggtgcatttggtggcgagattatcgcctcaggaacgcccaaa
caagtttcaaaagtaaaaaaatcaattactggacagtatctgtcaggtaagaaagctatc
ccagtaccagaagaaagacgaaaaggaaatggccgttttattgaactaaaaggagcatca
gaacacaatcttcaatcagttgatgtcaagtttccacttggtaagtttattgctgtgaca
ggtgtatcagggtctggtaaatcaaccttagtaaatagtattttgaaaaaggtcatcgct
caaaaattaaatcgtaattcagaaaaacctggtaaatataaatctattactggtattgaa
catttagatcgccttattgatattgatcaaagtccgataggaaggacacctcgttctaat
ccagctacctacaccggtgtttttgatgatattcgtgatttatttgcacaaacgaatgaa
gctaaaatcagagggtacaaaaaaggacgtttctcatttaatgttaaaggtggacggtgt
gaagcttgttcgggagatggtattatcaagattgaaatgcatttcctaccagatgtttat
gtcccttgcgaggtttgtcatggaacaaggtataattcagggacattagaagttcgctac
aaggataaaaatatttctgaagtattggacatgacagtaagtgatgccttagaattcttt
gcgtcaattccaaaaattgcacgaaaaattcaaaccataaaagatgttggcttgggttat
gtgacattaggccaaccagcgacaaccttatcaggtggagaagcacaacgtatgaaacta
gcttctgaacttcataaacgttctacgggtaagagtttttacattttagatgaaccgaca
actggactccatacagatgatatagcgagattattaaaagttctggagcgctttgttgat
gatggcaatactgtcttagtcattgaacataatttagatgtcatcaaatcggcagatcat
atcattgatttaggacctgaaggtggtgttggtggtggaactattatcgccactggaaca
ccagaagaagttgctaaaaatcctgatagttttacgggtcactatctaaaaatgaaacta
taa
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