Staphylococcus ureilyticus: MUA21_08220
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Entry
MUA21_08220 CDS
T08759
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
sury
Staphylococcus ureilyticus
Brite
KEGG Orthology (KO) [BR:
sury00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sury03009
]
MUA21_08220 (rlmD)
Enzymes [BR:
sury01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
MUA21_08220 (rlmD)
Ribosome biogenesis [BR:
sury03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
MUA21_08220 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_15
Methyltransf_25
TRM5-TYW2_MTfase
Cons_hypoth95
MTS
TRAM
N6_N4_Mtase
Methyltransf_11
PrmA
Methyltransf_12
PDGF
CMAS
PCMT
S1
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
UXS59105
LinkDB
All DBs
Position
complement(1656634..1657995)
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AA seq
453 aa
AA seq
DB search
MSIIQKNEIIEGRVIDLTHEGHGVVKLDRYPVFVPNSLIDETIKFKVIKVKKNFAIGKLI
EVKEQSNERIEPPCVYYYKCGGCQLQHMTYQAQLNMKKEQVVNLFHRKADFKETIINETV
GMENPWYYRNKSQIPVGKNKEGEIISGFYRQRSHDIIDMETCLIQDQLHQKVMNRLKVWF
NELNISVYNEQKKQGLMRHVVIRTGHHSRELMVIFVTNGRKFKQSDLLVQKLIDTFPEIT
SIKHNINNTHSNVILGAESNTLYGETTINDKLSDVTFKISDQSFYQINSIQTEKLYQLAI
EYANLNQDDIVLDTYCGIGTIGLYMAPKAKHVYGVEVVPEAIEDAQQNATINQFENTTFV
CGKAEEVILKWKSQGIKPDVVMVDPPRKGCDETFLQTLLELNPRKIVYISCNPSTQQRDA
QYLAQHYKLTKITPVDMFPHTTHVETVAQFNRI
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgagcataatacaaaaaaatgaaattatagaaggacgcgtaattgatttaacacatgaa
ggacatggcgttgtaaagttagaccgttatcctgtgtttgttcctaatagtttaatagat
gaaacgattaaatttaaagtgatcaaagtaaaaaagaattttgcgataggtaaattaata
gaagttaaagaacaaagtaatgaacgtatcgagccaccctgtgtatattattacaaatgc
gggggctgtcaattacaacatatgacataccaagctcaattgaatatgaagaaagaacaa
gtggttaatttgtttcatcgaaaagcagattttaaagaaacgataattaatgaaacagtt
ggtatggaaaacccctggtattatcgaaataaatcacaaatacccgttggaaagaataaa
gaaggagagattatctcaggtttttatagacaaagaagtcacgatattatagatatggaa
acatgtttaattcaagaccaattgcatcaaaaagttatgaaccgacttaaagtttggttt
aacgaattaaatattagtgtttataatgaacaaaaaaaacaagggcttatgagacatgtt
gttatacgtactggacaccattcaagagaattaatggttatttttgtgacaaatggcagg
aagtttaaacaaagtgatttacttgtacaaaaattaattgatacatttcctgaaatcacg
agtattaaacataatatcaacaatacacattccaatgtgatattaggagccgagtctaat
accttatatggtgagacaacaattaatgataaactatcagacgttacttttaaaataagc
gatcaatctttttatcaaattaattcgatacaaactgaaaaattgtatcagcttgcgatt
gaatatgcaaacttaaatcaagatgatattgtcctggatacatattgtggtattggaaca
ataggtttatatatggcaccaaaagcaaaacatgtttatggagtagaagtcgtgccagaa
gccattgaagatgcacaacaaaatgcgactataaaccaatttgaaaatactacttttgtc
tgtggtaaggcagaagaggttatattaaaatggaaatcacaaggaattaaaccagatgta
gtgatggttgacccacctagaaaaggctgtgatgaaacatttttacaaacattattagaa
ttaaatccaagaaaaattgtctatatttcatgtaatccatctacacagcaacgtgatgcg
caatatttagcgcaacattacaaactaacgaaaattacaccagtagatatgtttccacat
acaacacatgttgaaacggttgcacaattcaaccgtatttaa
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