Candidatus Solibacter usitatus: Acid_1174
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Entry
Acid_1174 CDS
T00412
Name
(GenBank) ATP-dependent DNA helicase, Rep family
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sus
Candidatus Solibacter usitatus
Pathway
sus03420
Nucleotide excision repair
sus03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Acid_1174
03430 Mismatch repair
Acid_1174
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sus03400
]
Acid_1174
Enzymes [BR:
sus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Acid_1174
DNA repair and recombination proteins [BR:
sus03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Acid_1174
MMR (mismatch excision repair)
Other MMR factors
Acid_1174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ADDB_N
AAA_25
AAA_12
ResIII
Motif
Other DBs
NCBI-ProteinID:
ABJ82168
UniProt:
Q029V8
LinkDB
All DBs
Position
1443242..1445608
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AA seq
788 aa
AA seq
DB search
MDFLKGLNAQQREAVTHIDGPLLILAGAGSGKTRVITHRIAHIITSRHVPPSAVLAVTFT
NKAAKEMRERVAALLEDVPLDSMPTVSTFHSFCVRLLRRDGDPLARVRPGFTRRFTIYDD
EDQLQIIKAAYRTLGFDEKEFMQYRAALSRISHAKNTKVTPQEMFRDAVNKESEAVAALY
EEYEKALRNANALDFDDLLLEAVRLLRTDDATRESWNRRLSYVMIDEYQDTNRSQYELMR
LLTEQHQNVCVVGDEDQSIYSWRGADIKNILDFEKDYPRAKTIRLEQNYRSTKNILAAAG
AVVENNKARKGKKLWTESDSGELLGLYAGYDSENEALFIADTTEKYLASNPGDHVAILYR
TNSQSRQIEEALRRYGRKYNVVGGFSFYQRAEIKDMVAYLKLASSNVDSVSLMRVINTPA
RGIGRTTVEQIERYGRDHGLNLWESIERIIDDQQLSTRSQSSLVVFRNLIQELSLVASTS
SLPDLIRHILERTGYRKMLQQEKTPESETRLENLDELINAAADAHERGETLGDFLDNAAL
VADVDSYDEQSPVTLMTLHNAKGLEFPLVFLSGMELGLFPHSRSMNSEEALEEERRLCYV
GMTRARKKLVLTWAKMRRRFGGGEQERSTASWFLSEVPENLIFNLGPRDEPGEVDLYSER
YDVRQSARRNTYTGKTYNSLDNISQFFGERGLPFKPGQSAPAPPKPDLRTPPQYPRPIGS
APMPMKQVPPPPPPRKGARAGMTVEHPKYGTGTVVRREGEGDDAKITVNFPRYGLKKLVE
KYAGLKRN
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggatttcctcaaagggctaaatgcgcaacagcgcgaagccgtaactcacatcgacgga
cccctgctgattctagccggagcgggaagcggtaagacccgcgttatcacccaccggatc
gcccacatcatcacgtcccggcacgttccaccgtcagctgtgctggcagtgactttcacc
aataaggctgccaaggaaatgcgggaacgggtggccgcgctgctcgaggatgtgccgctg
gattcgatgcccacggtcagcacctttcattccttttgcgtgcgcctgctgcgccgggat
ggcgacccgctggcgcgggttcgtcccggattcacccggcgcttcacgatctacgacgac
gaagatcagctgcagatcatcaaagccgcctaccgcacgctgggtttcgacgagaaagag
ttcatgcagtaccgcgcggctctctccagaatcagccacgccaagaacaccaaggttact
ccgcaagaaatgttccgggacgcggtcaacaaggagagcgaagccgtcgccgcgttgtac
gaggagtacgagaaggctctgcgcaacgccaacgcgctggacttcgacgacctgctgctg
gaggccgtgcgcctgctgcgcactgacgacgccacgcgcgagagctggaaccggcgcctg
agctacgtcatgatcgacgagtatcaggacaccaatcgcagccagtatgaactgatgcgc
ctgctcaccgagcagcaccaaaacgtgtgtgtcgtgggtgacgaggaccagtcgatttat
agctggcgcggcgcggacatcaaaaacattctggatttcgagaaggattatccgcgcgcc
aagaccatccggctggaacagaactaccgctccacgaagaatattctggcggcggccggc
gccgtggtggagaacaacaaggcgcgaaagggcaagaagctctggaccgaatccgactcg
ggcgagctgctcggtctttatgccgggtacgattcggagaacgaagccctcttcatcgcc
gacaccacggagaagtacctggcgtcgaacccgggcgaccatgtcgcgattctgtaccgt
acgaattcgcaatcgcgccagatcgaagaagcgctgcgccgttatggccgcaagtacaac
gtagtcggcggcttcagcttttaccagcgggcggaaatcaaggacatggtcgcgtatctc
aagctcgcttcctcgaatgtggattcggtgagcctgatgcgggtgatcaatacgccggcg
cgcggcatcggacggaccacggtagagcagatcgagcgctacggccgggatcacgggctc
aacctgtgggaatcgatcgagcgcatcatcgacgatcagcagctttccacgcgctcgcaa
tcctccctggtggtcttccgcaacctgatccaggagctctcgctggtggcgagcacttct
tcgctgccggacctgatccgccacattctggagcgcaccggctatcgcaagatgctgcag
caggagaagacgccggaatccgagacgcggctggaaaacctggatgaattgatcaacgcc
gccgccgacgctcacgagcgcggcgaaaccctgggcgactttctggataatgcggcactc
gtggccgatgtcgattcgtatgacgagcaatcgcccgtcacgctgatgacgcttcacaat
gccaagggcctggagtttccgctggtatttctgagcggtatggaactaggcctgttcccg
cacagccggtcgatgaattccgaggaagcgctggaggaagagcgccgcctctgctacgtg
ggtatgacccgcgcgcgtaagaagctggtgcttacctgggcgaagatgcggcggcgattt
gggggcggggaacaggagcgttccaccgcgagctggttcctgagcgaggtgccggagaat
ttgatctttaacctcggcccgcgcgacgaaccgggcgaggtcgatctttattcggagcgc
tacgatgtgcggcagtctgcccggcgcaacacgtatacggggaagacctacaactcgctc
gacaatatctcgcagtttttcggtgagcgcggcctgccgttcaagccggggcaaagcgct
ccggcgccgccgaagccggatttgcggacgccgccgcagtatccgcggcccatcggcagc
gctccgatgccgatgaaacaggttccaccaccgccgcctccccgcaaaggggcgcgcgcg
ggaatgaccgtggaacatccgaaatacggcacaggtaccgtggtacggcgcgaaggggag
ggtgatgatgctaagatcacagttaactttcctcgctacggattaaagaaattagtcgaa
aagtacgcaggattgaaaagaaactga
DBGET
integrated database retrieval system
