Candidatus Solibacter usitatus: Acid_1778
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Entry
Acid_1778 CDS
T00412
Name
(GenBank) Peptidoglycan-binding domain 1 protein
KO
K21470
L,D-transpeptidase YcbB
Organism
sus
Candidatus Solibacter usitatus
Brite
KEGG Orthology (KO) [BR:
sus00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sus01002
]
Acid_1778
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sus01011
]
Acid_1778
Peptidases and inhibitors [BR:
sus01002
]
Cysteine peptidases
Family C82
Acid_1778
Peptidoglycan biosynthesis and degradation proteins [BR:
sus01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
Acid_1778
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
ABJ82768
UniProt:
Q027N9
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All DBs
Position
2213545..2214750
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AA seq
401 aa
AA seq
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MRAPLSRSSVWLTLSVLILSCTVFQLGQARLRNPSVPPDEYERTLRALDQYRALAAAPDE
VFVPVTGTVKPGDAYSDAPLLIRRLSLLGDLAADAVPSDSDVYEGELVEAVKRFQSRHGL
KPDGRIEATTLGQLNVPLCARVRQLELSAERWRRHPYDPTRPAIVLNLPEFRLRAYGGTD
AGSDPELEMKVVVGKAPDHKSPILLSQLQAVIFRPYWKVPVSIQRNELLPLIRKDPAWVS
ANRFELVTPQGEVAEEEKLSEETLEDISTGKLQLRQKPGPKNSLGLVKFLFPNEYGVYMH
DTAAHSLFARERRDLSHGCIRVEKPEDLAAWVLREQSDWPRERIEEAMQGTEPVSVKVKR
PIQIVMMYSTASVMKNGEVHFFRDIYGEDAVLEKELAARRK
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgagagcaccgctgtcccggtcatctgtgtggctgacgctgagcgtgttgattctttcg
tgcacggtattccaactgggacaggcgaggctgcgaaatccgtccgtcccgcccgacgaa
tatgagcgcacgctgcgtgcgctggaccagtaccgcgcccttgcggcagcgcctgacgaa
gtcttcgtgcccgttaccgggaccgtcaaaccgggcgatgcttactccgatgcgccgctc
ctgattcgccgcctctcgctgctcggcgatcttgcggcggacgccgttccctcggattcg
gacgtgtatgaaggcgagctcgtggaagccgtgaaacgttttcaatcccggcatgggctg
aaaccggatggccgcatcgaggccaccacgcttggccagctgaacgtgccgctctgcgcg
cgggttcgtcaattggagctctcagcggagcggtggcgccgccatccctacgatcccacg
cgtcccgcgattgttctgaatctgccggaatttcgattgcgcgcctatggcgggaccgac
gccgggtccgatcccgagctggaaatgaaggtggtagtcggcaaggctcccgaccacaag
agccccattttgctttcacagctccaggcggtgatcttccggccgtattggaaggtgccg
gtcagtatccaacgtaacgagctgctgccgttgatccggaaggaccctgcgtgggtctcg
gccaaccgcttcgaattggtcactccgcagggtgaagtggcggaggaggagaagctctcg
gaggaaacgctggaggacatcagtacgggcaagttgcagctccgccaaaagccggggccc
aagaattccctggggctggtgaagttcctattccccaacgaatatggcgtctacatgcac
gacaccgcggcgcactcgctcttcgcccgcgaacgccgcgatctcagtcacggctgcatc
cgcgtggagaagccggaagacctggcggcgtgggtgctgcgcgagcaatccgactggccg
cgtgagcgcatcgaggaggccatgcaggggaccgaacctgtctccgtaaaggtcaagcgc
ccgattcagatcgtgatgatgtactccaccgccagtgtcatgaagaatggcgaggttcac
ttcttccgcgacatctatggcgaagatgcagtcctcgaaaaagagctggccgcgcgccgg
aaataa
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