Candidatus Solibacter usitatus: Acid_2029
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Entry
Acid_2029 CDS
T00412
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
sus
Candidatus Solibacter usitatus
Pathway
sus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Acid_2029
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sus03021
]
Acid_2029
03019 Messenger RNA biogenesis [BR:
sus03019
]
Acid_2029
Transcription machinery [BR:
sus03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Acid_2029
Messenger RNA biogenesis [BR:
sus03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Acid_2029
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA
Fungal_virus_P2_C
NACHT
AAA_22
AAA_25
ATPase_2
S1CSD-TOTE-2
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
ABJ83019
UniProt:
Q026Q0
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All DBs
Position
2569775..2570998
Genome browser
AA seq
407 aa
AA seq
DB search
MSIQKLNDVAKGMNIAGAAGLRKQELIFKILQTQAEKSGLIFSEGVLECLPDGFGFLRAP
EYNYLPGPDDVYVSPSQIRRFDLRTGDTISGQIRPPKEGERYFALIKVDAINFEPPEEAR
NKIFFDNLTPLYPNERLKLETAKDNYSGRVMDLLTPIGKGQRGLIVSPPRTGKTMLLQSI
ANSVTTNHPEVTLIVLLIDERPEEVTDMQRSVRGEVISSTFDEPATRHVQVAEMVIEKAK
RLVEHKRDVVILLDSITRLARAYNTIVPPSGKVLSGGVDSNALQRPKRFFGAARNIEEGG
SLTIIATALIDTGSRMDDVIFEEFKGTGNMEIHLERKLVDKRVFPAIDINKSGTRKEELL
LPKDELNRVWILRKVLNPLSPVETMELLLDKLSKTMSNAQFLGSMSG
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgagcattcagaagctgaatgacgtggccaagggaatgaatatcgccggcgccgccgga
cttcgcaaacaggaactgatcttcaagatcctgcagacccaggccgagaagagcggcctg
atcttcagcgaaggcgtgctcgaatgcctgcccgatggcttcggcttcctgcgcgcgccc
gagtacaactaccttcccggccccgacgacgtctatgtttcgcccagccagatccgccgt
ttcgacctgcgcaccggcgacaccatcagcggccagatccgcccgcccaaggaaggcgag
cgctacttcgcgctgatcaaagtagacgctatcaacttcgaaccgcccgaggaagcgcgc
aacaagatcttcttcgacaacctgacgccgctgtatcccaacgagcggctcaagctcgag
accgcgaaggacaactattcgggccgcgtgatggacttgctgactcccatcggcaaggga
cagcgcggactgatcgtttcccctccgcgcaccggtaagacgatgctgctgcaaagcatc
gcgaactcggtgaccaccaatcatcccgaagtcacgctgatcgtactcctgatcgacgag
cgtcccgaggaagtcaccgatatgcagcgcagcgtgcgcggcgaagtcatcagttccacc
ttcgacgagcccgcaacgcgccacgtacaggtggccgagatggtgattgagaaggccaag
cgccttgtcgaacacaagcgcgacgtcgtaatcctgctggattccatcacgcgcctggcg
cgcgcctacaacaccatcgtcccgccgagcggcaaggtgctctcgggcggcgtggattcg
aatgcgctgcagcgtccgaagcggtttttcggcgcggcgcgcaacatcgaagagggcggc
tcgctgaccatcatcgcgaccgcgctgatcgataccggcagccgcatggacgacgtgatt
ttcgaagagttcaagggcaccggcaacatggaaatccacctggaacgcaaactggtggac
aagcgcgtgttcccggcgatcgatatcaacaagagcggcacgcgtaaggaagagctgctg
ctgcccaaggacgaactcaatcgcgtgtggatcctgcgcaaggtgctgaaccccttgtcg
cctgtcgagactatggagttactgctcgataagctcagcaagaccatgagcaacgcgcag
ttcctcggctcgatgagcggctag
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integrated database retrieval system
