Candidatus Solibacter usitatus: Acid_2358
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Entry
Acid_2358 CDS
T00412
Name
(GenBank) Collagen triple helix repeat
Organism
sus
Candidatus Solibacter usitatus
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-ProteinID:
ABJ83347
UniProt:
Q025H2
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All DBs
Position
complement(3003972..3005489)
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AA seq
505 aa
AA seq
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MKRLFSRILIVCPLTCGCLAAQIQLALNPSPSSLQINQSSGLLISLTNTNAESNALVQHG
DVLRFYLALGDGGVLSVGGNPIVGGRAFHDGDWTVDTSAGLNPVALVYQGPNRVWTALES
VAVPLNIRPPTSTTVGVIVLRIPMDGRYAGQEWQTNPINIVGAGLLPRGDTGPAGATGAA
GPTGPQGPIGPYGAMGIQGPMGSPGGTGPVGANGATGPMGPMGPAGPQGLSGAMVFYGDG
SEGALSISTAVDWNVTPPAGMLQFSSFTITPTGSLTIPSGLVIRVTGSVNIMGPITVGPG
SWNYGSNCYSAPQSTAGTPALAPLQARFMLRPPPVGIPPLGYDYGGATGGGVAILSAGPM
TITGNGSIRASGLDGSLYSGNSGSVLWAASPGGLVVLGSRASISNAGSIVANGGKGADGD
WYHGSGGGGGGGIVHFFAPFISSGSVDVSGGIGAAGHGGTYTFVVGGACGGSGGSSNIAG
QPGGAGGSGQVFRTITAEPAALFVP
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgactgttcagcagaatcctgattgtctgccccctaacatgcggatgtttggcg
gcccaaattcaactggcgctaaatccatcgccatcgtcgctccagatcaatcagagcagc
ggcctgctgatttcactcacaaatacgaatgccgaatcgaacgccctggttcaacatggg
gacgtgctgcggttctacctggctttgggagacggaggggttctgtctgtaggcggaaac
ccgattgtcggtggtcgagcttttcacgatggtgactggacggtggatacatcggcgggc
ctcaatcccgtcgcgctggtctaccaaggcccaaatcgagtctggaccgctctggagagc
gttgcggttccactaaatatccgtcctccaacctccaccacagttggtgtgatcgtgttg
cgcatcccaatggatggacgctatgccggtcaggaatggcagacgaacccgatcaacatt
gtgggcgccgggctattgcctcggggcgataccggaccggccggagcaactggcgccgct
ggcccgaccgggccccaaggaccgatcggcccctacggagcgatgggcatccaagggcct
atgggctcgccggggggaacgggaccggtgggggccaatggggcgacagggccaatgggg
ccgatgggtcccgcgggcccccagggattatccggcgcgatggtattttacggcgatggc
tccgagggcgcgctgagcatctccaccgctgttgactggaacgtaaccccacccgccggc
atgctgcaattctccagcttcacgattacccccaccggctcgctgactattccaagcggc
ctggtgattcgggtcactggaagtgtgaatatcatggggccgattacggtcggccctgga
tcatggaactacggcagcaattgttattcggcgccgcagagtacggctggcacacctgcc
ctcgccccgctccaagcgcgattcatgctgaggccgccccccgtgggaattccccctttg
ggatacgattacggcggcgccaccggcggcggtgttgcaattctttccgccgggcccatg
acgatcaccgggaatggctcgatcagagcctctggtttagatggaagcctttatagcggc
aattccggcagtgtcctctgggcggcaagccccggtggactcgtggtcttgggatcccga
gcctcgatcagcaacgcgggaagcattgtcgcaaacggaggaaagggcgctgacggtgac
tggtaccacggctcgggtggcggtggaggaggcggcatcgtccacttcttcgcgcccttt
ataagctccgggagcgtggatgtatctggcggaattggcgccgccggccatggcggcact
tacactttcgttgtcgggggagcatgcggcggaagtggcggatcttctaacatagcgggt
cagccgggcggcgccggcggaagcgggcaggtgttcagaaccattaccgcggagccagcc
gccttgttcgtaccgtga
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