Candidatus Solibacter usitatus: Acid_4299
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Entry
Acid_4299 CDS
T00412
Name
(GenBank) histone family protein DNA-binding protein
KO
K05788
integration host factor subunit beta
Organism
sus
Candidatus Solibacter usitatus
Brite
KEGG Orthology (KO) [BR:
sus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sus03032
]
Acid_4299
03036 Chromosome and associated proteins [BR:
sus03036
]
Acid_4299
03400 DNA repair and recombination proteins [BR:
sus03400
]
Acid_4299
DNA replication proteins [BR:
sus03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Acid_4299
Chromosome and associated proteins [BR:
sus03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
Acid_4299
DNA repair and recombination proteins [BR:
sus03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
Acid_4299
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
VWA_3
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
ABJ85261
UniProt:
Q01YK4
LinkDB
All DBs
Position
5446544..5446882
Genome browser
AA seq
112 aa
AA seq
DB search
MTKADLIEEVSRVVEMTRKESEVIVEAIFDSIVRSLRTGDKIEIRGFGSFRTRQRQPRIG
RNPKTGARVEVPAKKIPYFKPSKELKDVVNNSATPVPPTAAVPPTPEQVPNP
NT seq
339 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaggccgacctgattgaagaagtctcccgagtagtggagatgacgcggaaggaa
tccgaagtcatcgtggaggcgattttcgacagcatcgtccgctcgctgcgcaccggtgac
aagatcgaaatccgcggattcggcagcttccgcacgcgtcagcgccagccccgcatcggg
cgcaatccgaagacgggagcgcgggtggaagtcccggccaagaagatcccgtatttcaaa
cccagcaaggaactcaaggacgtcgtgaataactcggcgaccccggttcccccgacggcg
gcggtacctccgacacccgagcaggtcccaaacccctaa
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