Candidatus Solibacter usitatus: Acid_4994
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Entry
Acid_4994 CDS
T00412
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
sus
Candidatus Solibacter usitatus
Brite
KEGG Orthology (KO) [BR:
sus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sus03016
]
Acid_4994
Enzymes [BR:
sus01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Acid_4994
Transfer RNA biogenesis [BR:
sus03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Acid_4994
Prokaryotic type
Acid_4994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
ABJ85951
UniProt:
Q01WL4
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All DBs
Position
6301387..6302109
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AA seq
240 aa
AA seq
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MRRIRIYLAYDGGPFHGWQVQPGLATIQGILEEIVGGMEGKPVHVAGSGRTDAGVHALAQ
VAAFSIENPIPVENLRRAVNRLLPPAIRILCAEEVQADFHPRFDAVAKTYEYRMFRDEVC
SPFEWPYVYHHPYPLDEARMATLARAFEGEHDFTPFAASDARDAEGKSKVRTIFSSTLDR
TPQRLVYRVRGSGFLKHMVRNIVGTLIEAGRGNIADLNSLPARSGATAPAKGLFQVSVEY
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgcatccgcatttatctcgcctacgatggcggaccgtttcacgggtggcaggtg
cagcccggcctcgccaccatccagggcattctcgaggaaatcgtcggcggcatggaaggc
aagcccgtccacgtcgccggcagcggccgcaccgacgccggcgtccacgcactcgctcag
gtcgccgccttcagcatcgaaaatcccataccggtcgagaacctccgccgcgccgtcaat
cgcctgcttcccccggccatccgaatcctctgcgccgaggaggtgcaggccgattttcat
ccgcgcttcgacgccgtggccaagacttacgagtaccgcatgttccgcgacgaagtatgt
agccctttcgagtggccgtatgtgtatcaccacccctacccgctggatgaagcacgcatg
gcaacgctcgcacgcgctttcgaaggcgagcacgatttcaccccattcgccgcctccgat
gcccgcgatgccgaaggcaagtccaaagtgcgcaccatcttctcttccaccctggaccgc
accccgcaaagactcgtctaccgcgtgcggggcagcggttttctcaaacacatggttcgc
aatatcgtcggcaccctgatcgaagccggtcgcggcaacatcgcggacctcaattccctg
cccgcccgctccggcgccaccgcccccgccaaaggtctctttcaggtcagcgtggagtat
taa
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integrated database retrieval system
