Candidatus Solibacter usitatus: Acid_5090
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Entry
Acid_5090 CDS
T00412
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sus
Candidatus Solibacter usitatus
Pathway
sus03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sus00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Acid_5090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sus03021
]
Acid_5090
03400 DNA repair and recombination proteins [BR:
sus03400
]
Acid_5090
Enzymes [BR:
sus01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Acid_5090
Transcription machinery [BR:
sus03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Acid_5090
DNA repair and recombination proteins [BR:
sus03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Acid_5090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
Spectrin_7
Motif
Other DBs
NCBI-ProteinID:
ABJ86045
UniProt:
Q01WC0
LinkDB
All DBs
Position
complement(6426796..6427839)
Genome browser
AA seq
347 aa
AA seq
DB search
MFKGFQKPKRLVANTETLTERYGMFTAQPFQRGFGTTIGNSLRRVLLSSIEGAAITAVRI
EGVEHEFSPIPGVVEDATDIILNLKQIPFKISSDGIKTVRLSVDSHGDVRSGQIETDADV
EVLDRDVHVATVSEGGKLNIEMRLKSGRGYVSADKNFDEDLALGYIPIDSVHSPVRKVNF
AVEAARLGQMTDYDKLTLEVWTNGAVSPQDSIGYAAKLLKDHMTIFINFEEVPEQTEEIS
ERGMDKMNEVLNRSVEELELSVRSYNCLKNANIQSIGELVQKTEAEMLRTKNFGRKSLNE
IKEILANMGLSLGMRIDQHGRLVAPPPSAGGGPDFGPEDDGQDQIGE
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgtttaagggctttcaaaaacccaaacgattggtcgccaataccgagaccctcacagag
cggtatggcatgtttacggcccagccttttcaacgcgggttcggcaccacgatcggcaat
agcctgcgccgcgtgctgttgagctcgatcgaaggcgcggccatcacagcggttcgcatc
gaaggcgtggaacacgaattcagccccatcccgggcgtagtggaagacgctaccgatatc
attctcaacctcaagcagatcccgttcaaaatttcgagcgacggcatcaagaccgtgcgc
ctctccgtggattcccacggcgacgtgcgcagcggccagatcgaaaccgacgccgatgtc
gaagtgctggatcgcgatgtgcacgtcgccaccgtgagtgaaggcggcaagctgaacatc
gaaatgcgcctcaagagcggccgcggctatgtcagcgcggacaagaatttcgatgaagac
ctggcgctcggctacattccgatcgattcggtgcattcgccggtgcgcaaggtcaacttc
gccgtggaggcagcgcgcctcgggcagatgacggattacgacaaactgacgctcgaagtc
tggaccaacggcgccgtgtcgccgcaggattccatcggctacgccgcgaagctgctgaaa
gatcacatgacgatcttcatcaacttcgaggaagtgccggagcagaccgaagagatcagc
gagcgcggcatggacaagatgaacgaagtcctgaaccgctcggtggaagaactggaattg
agcgttcgttcttacaactgcctgaagaacgccaacatccagagcatcggcgaactggtg
cagaagaccgaagccgaaatgctgcggaccaagaactttggccgcaagtcgctcaacgaa
attaaggaaattctggcaaacatgggcctctcgctgggcatgcggatcgaccagcatggt
cggctcgtggctcctccgccgtcggccgggggcggccccgacttcggacccgaggacgac
ggccaggaccagattggggagtag
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