Candidatus Solibacter usitatus: Acid_5180
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Entry
Acid_5180 CDS
T00412
Name
(GenBank) NusA antitermination factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
sus
Candidatus Solibacter usitatus
Brite
KEGG Orthology (KO) [BR:
sus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sus03021
]
Acid_5180
03009 Ribosome biogenesis [BR:
sus03009
]
Acid_5180
Transcription machinery [BR:
sus03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Acid_5180
Ribosome biogenesis [BR:
sus03009
]
Prokaryotic type
rRNA transcription factors
Acid_5180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_NusA_1st
KH_NusA_2nd
HHH_5
KH_2
KH_1
KH_NusA_C
S1
Motif
Other DBs
NCBI-ProteinID:
ABJ86133
UniProt:
Q01W32
LinkDB
All DBs
Position
6505721..6507349
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AA seq
542 aa
AA seq
DB search
MSGSPPGKILANTHFELDNEGTLETIFQSIEILSKEKGIDPQIVLDAVKDAMLIAARKHY
RSTEDYVADMDPKTGAIKLYAVKKVVEAVEDPSHEMTLAEARRIDSTAEVGGEVRIPKNT
DALGRISAQTAKQVIFQKVREAERETVFNEYSGRTGELVNCTIKRVEGPDYILDLGKTEA
KLPKKEQSRLEGYSVGDRVRCIIKLVDKSSKGPGVLVSRAAPELVMRLFEQEVPEIYDGT
VAIRGCAREAGERTKIAVQSRDRDVDSVGACVGMKGMRVQSIIRELRGEKIDIIEYSEDS
VVFATHALSPAKVSRITVIDPLEKHMEVIVDDSQLSLAIGKKGQNVRLAAKLLGWKIDIK
SEEEKRQEVESQMAALVAPGAPVSVLIDYGMAEEMAVKLLENGVATIEKLGAMTPEELEV
LPGIGPESVEGIQTAVVAYYSQFEDPASENAVSETAGSENTEQATAETTFETASEPAPAD
DDLYNPESGEERFEPGSEAAEAVSEEESESTEQFGTIVDAGSPHKQTDMAVPESTPEKGS
GE
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
ttgagtggtagcccgccggggaagattttagccaacacacattttgaattggataacgag
ggcactttggaaacgatttttcaatccatcgaaatcttgagcaaggaaaaaggcatcgac
ccgcagatcgtgctcgacgcggtcaaggacgcgatgctgattgccgcccggaaacactat
cggagcacggaagattacgtggccgatatggatccgaagaccggggcaatcaagctgtac
gcggtcaagaaagtggtcgaggccgtggaggatccttcgcacgagatgaccctggcggaa
gccaggcggatcgattccaccgccgaagtcggcggcgaggtccggattcccaagaacaca
gacgccctgggtcgcatctcggcgcagaccgcaaaacaggtcatcttccagaaggtccgc
gaggccgaacgcgaaacagttttcaacgagtactccggtcgcaccggggaactcgtcaac
tgcaccatcaagcgagtcgagggacccgattacattctggatctggggaagaccgaagcc
aagctgcccaaaaaggaacagtcgcgcctggaaggctatagcgtgggcgaccgcgtgcgc
tgcatcatcaagctggtggataaatcgagcaagggaccgggcgtgctggtttcgcgcgcg
gctccggaactggtcatgcgcctgttcgaacaggaagtacccgaaatttacgatggcacc
gtcgccattcgcggctgcgcgcgcgaagccggggagcgcaccaagatcgcggtgcagagc
cgcgaccgcgacgtggatagcgtgggcgcctgcgtcggcatgaagggcatgcgcgtgcag
tccatcatccgcgaactgcgcggcgagaagatcgacatcatcgagtactcggaggattcg
gtggtcttcgccacccacgccctgagcccggccaaggtcagtcgcatcaccgtcatcgat
ccgctcgaaaagcacatggaagtgatcgtggacgattcgcagctctcgcttgccatcggc
aagaagggccagaacgtccgattggcggcgaaattgctcggatggaagatcgatatcaag
agcgaggaagaaaagcgccaggaggtggagtcgcagatggccgccctggttgcgcccggc
gctcctgtatcggtgctgatcgattacggcatggcggaagagatggccgtgaagctactc
gaaaacggcgtcgccacaatcgaaaagctgggcgcgatgactccggaagagctcgaagtg
ctgccgggcatcggacccgaatcggtggaaggaattcaaacggctgtggtggcatattac
agtcagttcgaagatccggcttcggagaatgcggtatcggaaaccgcgggatccgaaaat
acggaacaggcgacggccgagactactttcgaaaccgcgtctgaacccgcgccggcggat
gacgacctgtacaatccggagagcggggaggaacgcttcgagcccggctcagaagcggct
gaagcagtgagcgaggaagaatcggagagcacggaacagtttggtacgatagttgacgcg
ggttctcctcacaaacaaaccgacatggcggttccggagagcaccccggaaaaaggtagc
ggcgagtaa
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