Candidatus Solibacter usitatus: Acid_5497
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Entry
Acid_5497 CDS
T00412
Name
(GenBank) Exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
sus
Candidatus Solibacter usitatus
Brite
KEGG Orthology (KO) [BR:
sus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sus03016
]
Acid_5497
Enzymes [BR:
sus01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
Acid_5497
Transfer RNA biogenesis [BR:
sus03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Acid_5497
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
RNase_II_C_S1
S1
Motif
Other DBs
NCBI-ProteinID:
ABJ86444
UniProt:
Q01V71
LinkDB
All DBs
Position
complement(6891899..6893353)
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AA seq
484 aa
AA seq
DB search
MNNHQVDLASIARQEMIDHGFQPDMPPEATQQAEKSSQAVPAGLKDLTALLWSSIDNDDS
RDLDQIEWAERTPAGIRVLVAIADVDSAVAKGSPADRHAASETTSVYAQIRTFPMLPLKL
STDRTSLNENENRAAVVIEMTVCAEGSIGANSIYRALVRNRAQLTYSAVGAWLEGKGSMP
AKVASSAELQQQLQLQNEAAHCMRAARDRLGALTFDRAELQATVENGRVSGIDARRANTS
SRLIEDFMIGANEVMAQTLRSAGVTSIRRVVKDPERWPRMVELAATYGYHLPPDPDPAAL
NAMLVARKKADPDHFADVSLTVLKLMGPGEYVASRPGTEATGHFGLAAHDYTHSTAPNRR
FADLVTQRLVKALAARQRSPYSDAELDSIAANCTLKEDNARKVQRAMVKRLAAVALAGRV
GQTFSAVVTGVTPKGVFVRITDPPVEGRLMRGEEGLDVGDRVQVTLLNTDAARGFIDFGS
RQDG
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatcaccaggtggacctggcctcgatcgccaggcaggaaatgattgaccacggc
ttccagcccgacatgccgccggaagccacccaacaggccgagaaatcgagccaagcggtg
cccgccggactgaaggatctgaccgcgctgctgtggtcttccatcgacaacgacgattcg
cgcgacctggaccagatcgagtgggcggaacgcacgcctgcgggaattcgcgtgcttgtg
gcgatcgcggacgtggatagcgcggtcgcgaagggttcgccagccgaccggcacgccgcc
agcgaaacgacttcagtgtacgcgcagatccggaccttcccgatgctgccgttgaagctc
tccacggaccgcacgtcgctcaatgagaacgagaatcgcgcggcggtggtgatcgagatg
acggtgtgcgccgaaggttcgatcggcgccaacagcatttatcgcgcgctggttcgcaat
cgcgcccagttgacctacagcgcagtgggcgcgtggctcgaaggcaaggggtcgatgccc
gcgaaggtggcgtcctcggcggagttgcagcagcagcttcaattgcagaacgaagcggcg
cactgcatgcgcgcggctcgcgaccgattgggcgcgctcacgttcgaccgcgccgaactg
caggcgaccgtggagaacgggagggtgagcgggatcgatgcgcgccgcgcgaacacctcc
tcgcggctgatcgaagatttcatgatcggcgccaacgaagtgatggcgcagacgctgcgc
tcggcgggcgtaacgtccattcgtcgcgtagtgaaagatccggaacgatggccgcgcatg
gtggagctggcggcaacatatggataccacttgccgccggatccggacccggccgcgctt
aatgcgatgctagtggcgcgcaagaaggcagaccccgaccatttcgcggatgtgtcgctc
acggtgctgaagttgatggggccgggtgaatatgtggcgtcccgtccggggacagaagcg
accggccacttcggcctcgcggcacacgattatacgcactccaccgcgcccaatcggcgg
tttgcagatctggtgacgcagcgcctggtcaaggcgctcgccgcccgccaacgctcgcca
tatagcgatgcagaactcgattccatcgcggccaattgcaccttaaaggaagacaatgcg
cgcaaggtgcagcgcgcgatggtgaagcgcctcgccgcggtcgcgctggccggacgggtg
gggcaaacgttctccgcggtggtcacgggcgtgacgccgaagggagtgttcgtgcgcatc
accgaccctcccgtggaaggccgcctgatgcgcggtgaagagggactggatgttggcgac
cgcgtgcaggtgacgctgttgaacaccgatgcggcgcgcgggtttatcgatttcgggagt
agacaagatggctaa
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