Candidatus Solibacter usitatus: Acid_5841
Help
Entry
Acid_5841 CDS
T00412
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
sus
Candidatus Solibacter usitatus
Brite
KEGG Orthology (KO) [BR:
sus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sus03009
]
Acid_5841
Enzymes [BR:
sus01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Acid_5841
Ribosome biogenesis [BR:
sus03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Acid_5841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Cons_hypoth95
MTS
TRM5-TYW2_MTfase
RrnaAD
Methyltransf_25
Methyltransf_31
Motif
Other DBs
NCBI-ProteinID:
ABJ86786
UniProt:
Q01U84
LinkDB
All DBs
Position
7317646..7318815
Genome browser
AA seq
389 aa
AA seq
DB search
MEKLVYGGDGLGRLEGRVVFAPFVLPGERIRAQAEKEKPGMVRARMLEVLAAAPDRVSAP
CPVFGRCGGCHYQHAPYEYQLATKQAILAEEMRRLGKIEPPEEIAVVSSEPFGYRNRVQL
HVEESRIGYREARSHKLCAVGQCPVGSPKIEAAIRALNEMARDSRWPRFMKSIEVFSDEN
QVQLNVLETERPVARRFFDWCGEKIPGMVEGALDYEGRFRVSSNSFFQVNRFLIDRLVEV
AIEGAEGDTALDLYAGVGLLSLPLARKFREVTAVESGAGAVRDLQFNAERNGLANVRALP
KTAEEYLLALEAAPDLVVLDPPRTGLGKTVVKRLSELRPRQVTIVACDPATLARDLAGLV
AAGYRVEKMTLVDLFPQTYHLETVVRLTF
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaagctggtgtacggaggcgatggtctcggccggctggaagggcgcgttgtcttc
gcacccttcgtgctgccaggcgaacgaattcgggcacaggccgagaaggaaaagcccggc
atggtgcgggcgcgtatgctggaagtgctcgcggccgccccggatcgcgtaagcgcgccg
tgtccggtattcgggcgctgcggcggttgccattaccagcacgcaccctatgagtatcag
ctcgccaccaagcaggcgatcctcgcggaagagatgcggcggctaggcaagatcgagcca
cccgaggagatcgcggtggtctcgtcggagccattcggctatcgcaatcgtgtgcagctg
cacgtggaggaatcgcggatcggatatcgcgaggcgcggtcgcacaagctgtgcgcggtg
gggcagtgccccgtgggatcaccgaagatcgaggcggcaatccgcgccttgaacgagatg
gcgcgggacagccgctggccgcggttcatgaaatcgattgaagttttcagcgatgagaac
caggtgcagctcaacgtactcgagacggagcgtccggtggctcgtcgcttcttcgattgg
tgcggcgagaagattccggggatggtggagggcgcgctggattacgaaggccgcttccgg
gtgagcagcaattcgttcttccaggtgaatcgcttcctgatcgaccggttggtggaggtc
gcgatcgaaggggcggagggcgatacggcactggatttgtatgccggcgtgggcctgcta
tcgctgccgctggcgcggaagttccgtgaagtgacggcggtggaatcgggcgcgggcgcg
gtccgcgatctacaattcaacgcggagcggaatggactcgcgaacgtgcgtgcgctgccc
aagacggcggaggaatacctgctggcgttggaggctgcgccagacctggtagtgctggat
ccgccgcggacaggcttggggaagaccgtggtgaagcggttgagcgaattgcggccgcgg
caggtgacgatcgtggcctgcgatccggcgaccctggcgcgcgaccttgccggactggtg
gcggcaggctatcgcgtggagaagatgacgctggtggatttgttcccgcagacctaccat
ctggagacggtggtgcggctgacgttctag
DBGET
integrated database retrieval system
