Candidatus Solibacter usitatus: Acid_6299
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Entry
Acid_6299 CDS
T00412
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sus
Candidatus Solibacter usitatus
Brite
KEGG Orthology (KO) [BR:
sus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sus03016
]
Acid_6299
Enzymes [BR:
sus01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Acid_6299
Transfer RNA biogenesis [BR:
sus03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Acid_6299
Prokaryotic type
Acid_6299
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
ABJ87225
UniProt:
Q01SZ5
LinkDB
All DBs
Position
complement(7917578..7918459)
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AA seq
293 aa
AA seq
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MDGVIVIDKPEGWTSHDVVNKVRRIAKTKKVGHLGTLDPIATGVLPLVIERATRLAQFYT
RSEKIYEGLVRFGWSTSSYDRAGEPTSEKVEVQLTAEQLEHALENFRGEFLQRPPAVSAK
KVEGKRSYELARKNMAVELEPVKVHVYELTLLALEGNLARLRAHCSGGTYMRSIAHDLGQ
ALGCGAHLQELRRLASGEFELDQARTLEQLESLAAEDRLPDAIVPAGKLLPAFPSVFVDE
ITAAQIRNGRDFPASPFRSQPASKYVKAVTRTGDLVAIGEVVLPNLYHPTVVM
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
ttggacggagtgatcgtaatcgacaagcccgagggctggacctcgcacgacgtggtgaac
aaggttcgccgcatcgccaagaccaagaaggtcggccacctcgggacgctggacccgatc
gccacgggagtgctgccgctagtgatcgagcgcgccactcgcctggcgcagttttacacg
cgcagcgagaaaatctacgaggggctggttcgctttggctggtccacgagcagctacgat
cgcgccggagaacccaccagtgaaaaggtcgaggtacagttgacggcggaacaactggag
catgcgctcgaaaacttccgcggcgagttcctccagcggccgcccgcggtttcggccaag
aaagtggaggggaaacgctcctacgaactcgcgcgtaagaacatggcggtggaactggaa
ccggtgaaggtccacgtgtacgaattgacgctactcgcgctcgaaggcaacctggcgcga
ttgcgggcgcactgctcgggcgggacttacatgcgctcgatcgcgcacgatctgggccag
gcgttgggatgcggcgcgcacctgcaggagctgcgccggctggccagcggcgaattcgaa
ctcgaccaggcgcgtacgctcgagcaactggaatcgctggccgccgaagaccggctgccg
gatgccatcgtgcccgcagggaagctactccccgcattccccagcgtgttcgtggacgag
atcaccgcggcgcaaattcggaatggacgcgatttcccggcttcgccttttcgctcgcag
cccgcgtcgaaatatgtgaaggccgtgacgcgcaccggcgaccttgtagcgatcggcgag
gtagtgctgcccaacctttatcacccgaccgtcgtgatgtag
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