Candidatus Solibacter usitatus: Acid_6918
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Entry
Acid_6918 CDS
T00412
Name
(GenBank) excinuclease ABC, A subunit
KO
K03701
excinuclease ABC subunit A
Organism
sus
Candidatus Solibacter usitatus
Pathway
sus03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Acid_6918
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sus03400
]
Acid_6918
DNA repair and recombination proteins [BR:
sus03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Acid_6918
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Acid_6918
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
AAA_21
AAA_29
nSTAND1
DnaJ_CXXCXGXG
AAA_33
AAA_16
RsgA_GTPase
AAA_25
AAA_23
NACHT
AAA_22
ATPase
MeaB
SLFN-g3_helicase
Viral_helicase1
DNAPolymera_Pol
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
ABJ87831
UniProt:
Q01R89
LinkDB
All DBs
Position
complement(8687247..8689811)
Genome browser
AA seq
854 aa
AA seq
DB search
MSTHKEFTGFVTVKGARQHNLKDIDVRIPRNALVVFTGVSGSGKSSLAFGTLYAEAQRRY
LDSVAPYARRLFEQIGIPEVDSIEGLPPAVALQQQRGSPTTRSSVGSVTTVSNLLRMIYS
RAGTYPPGQPELHGEAFSTNSPEGACPRCHGIGRVYEATEKTMVPDDSLTIRERAIAAWP
TAWGGQNQRDILVTLGYDVDRPWRELPRSDRDWILFTEDQPTVPVYAGFTPEETRRALKR
KEEPSYQGTFTGVRRYLLHTLAHTESALTRKRVLQFLIAAPCPACKGKRLRPESLSVKFA
GLDIAQISALPLTRLLELLRSAARSALTKPNASHPERGIVAQRITQDLVRRLAVMLDLGL
GYLSLERSTPTLSPGELQRLRLATQVCSNLFGVVYVLDEPSAGLHPADTEALLVALDRLK
ASGNSLFIVEHELDVIRHADWIVDVGPAAGEQGGRILYSGPPKGLNEVEESKTRLYLFGE
EGPVQRTPRSAGGWLRLDNVTRNNLHKLSVAFPLETLTAVTGVSGSGKSTLVSQVLVELI
GERLGQQRSSDPDDTESPGDDGPITLEGRITEGATAIKRLVQVDQKPIGRTPRSNLATYT
GLFDHVRRTFATTKTAKARRYTASRFSFNVSEGRCETCEGEGFVCVELLFMPSVYAPCSS
CHGARYNSKTLEIEYRGKNIAEVLAMTVDAASNFFDEQPQVSHALAVLQQVGLGYLRLGQ
AATELSGGEAQRIKLATELQRNQRGNTLYVLDEPTTGLHPSDVRRLVTQLDGLVGLGNTV
IVVEHDLDVIAASDYVIDMGPGAGEEGGRVVAVGTPVEVSNAVGSRTGSYLKRRLGLAME
GTHARENNRRQQAH
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgcacaaagagttcaccggattcgttaccgtcaagggcgcgcggcagcacaac
ctgaaggatatcgacgtccgcataccacgcaatgccctggtggttttcaccggcgtctca
ggatcgggaaaatcctcactggctttcgggactctttatgccgaggcgcaacgccggtac
cttgattcggtggcgccctatgccaggcgtctgttcgagcaaatcggcattccggaagtg
gacagcatcgagggtctgccgcccgcggtggcgcttcagcaacagcgcggatctcccacc
actcgatcttctgttgggagcgtaacgacggtgtccaacctgcttcggatgatctattcg
cgcgcgggcacatatcccccgggtcaaccggaactccacggagaggcattctcgacgaac
agcccggaaggcgcttgcccgcgctgtcacgggattggccgcgtttacgaggcgaccgaa
aagacgatggttcccgatgactcgctgacaattcgcgagcgagcgatcgccgcttggccc
accgcatggggcggacagaaccagcgcgacattctggtcacgcttggttacgatgtcgat
cgtccctggcgcgagctccccaggagcgatcgcgattggatccttttcaccgaagatcaa
cccacggtaccggtgtatgccggattcactccggaggaaacccgccgagctctcaagcga
aaagaggagccgagctatcaggggacgttcacaggcgttcgccggtatctgctccatacc
ctggctcacacggaaagcgcgctaacccggaagcgggtgctgcaatttctcatcgctgcg
ccgtgcccggcttgtaagggaaaacgtctgcggcccgagtctctctctgtcaaattcgcc
gggctggatatcgcgcagatctctgcgttgccgctcacccgtctgctggaactgcttcgc
tcggcggcccgcagtgcgttgacgaagccgaatgcttcccatcccgaacgtgggattgtc
gcacaacggattacccaagatctcgtccggcgcctcgcagtgatgctcgatctggggctc
ggctacctctcactcgaaagaagcacgcccacgctgtcgccgggcgagctgcagcggctg
cgcctggccacacaagtctgctcgaacctttttggggttgtttacgtgctcgacgaaccg
tccgccggactacatccggcagacaccgaggcgctgctggtggcgctcgaccggctcaag
gcgtctggcaactcgttgtttatcgtcgaacacgaactggacgtaatccgccacgcggac
tggatcgtggatgttgggccggccgccggcgaacagggcggccgcatactctacagcggc
ccgccaaaggggttgaatgaggttgaggaatcgaaaacgcgcctgtatttattcggtgag
gaggggccggtgcagcggacgcctcgaagcgccggcggatggcttcgcctggataacgtg
acccgcaacaaccttcacaaactgtcggtggcgtttccactggagaccctcacggcggtc
accggtgtatcaggctccggaaaatcgacgctggtgagtcaggtcctggtcgaactgata
ggtgaacgcctcggacagcagcgatcatccgatcccgacgacacggaatcccccggtgac
gacggcccgatcactttggagggccggattacggagggcgcgaccgcgatcaagcgattg
gtccaggtggatcaaaaaccgattggacgcacgccccgctccaatctcgcaacctacacg
ggcctgttcgatcacgtgcgcagaacattcgctacgacgaaaacggccaaggcacggcgc
tacactgccagccgcttctccttcaatgtctccgagggacgctgcgaaacctgtgaaggt
gagggcttcgtctgcgtcgaattgctgttcatgcccagtgtctacgcgccttgctcctca
tgccacggagcacgctacaactcgaaaaccctggaaatcgaatatcgtgggaaaaacatt
gccgaagttctcgcgatgacggtggatgcagccagcaatttctttgatgagcaaccgcag
gtgagccatgcgctcgcagttcttcagcaggtgggccttggatatctgcggctcggccag
gcggccactgaattgtctggcggggaggcgcagcgtatcaaacttgctacagaactgcag
cgcaaccagcgcggaaacaccttgtatgttctcgatgaaccaacgacggggctgcaccct
tcagacgttcgacgattggtgactcagcttgatgggctggtcggactgggcaacactgtg
atcgtggtggagcacgacctcgacgtaatcgcagcgagtgactacgtaatcgacatgggt
cccggcgcgggagaagagggaggccgcgtagtcgctgtcggtacgccggtagaggtgtcg
aatgctgtggggagccggacgggttcatatctcaagcggcgccttgggttggcgatggaa
ggaacccatgcgcgcgagaacaatcgccggcaacaggcgcattga
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