Candidatus Solibacter usitatus: Acid_7842
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Entry
Acid_7842 CDS
T00412
Name
(GenBank) Ku domain protein
KO
K10979
DNA end-binding protein Ku
Organism
sus
Candidatus Solibacter usitatus
Pathway
sus03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
Acid_7842
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sus03400
]
Acid_7842
DNA repair and recombination proteins [BR:
sus03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
Acid_7842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
GFO_IDH_MocA_C
Motif
Other DBs
NCBI-ProteinID:
ABJ88738
UniProt:
Q01NN2
LinkDB
All DBs
Position
complement(9837878..9838732)
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AA seq
284 aa
AA seq
DB search
MAASVWKGHLTFGMVSFPVRLFSAARSESISFNLLHKDDHSRIRQVTFCALEDKPIPRTE
TVKGYEYEKDHYVVIDDEDIKKVAPKTAKVMEILEFVKADQVDPIYLESSYYVAPDEGGE
KAYALLFQALRESSYYAVAKVAMHNREHIIVLRPGSKGILSHTMYYQDEIRQVEEFRTDT
SLVKDKELAMAKMLISSLEADFEPQKYHDTYRANLTKMIEDKIEGRNVVATPSEHVAPVI
DIMEALKKSLAEKRKPATVATAAEESGPIEVAPKKRTPRKTKAG
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaagcgtctggaagggccatctcaccttcggcatggtatcgtttcccgtccgc
ttattcagcgcggcgcgcagcgaaagcatctcctttaacctgcttcacaaggacgatcat
tcccgcattcgccaagtcaccttctgtgccctcgaagacaaaccgatccctcgcaccgaa
accgtgaagggctacgagtatgaaaaggatcattacgtcgtcatcgatgatgaggacatc
aagaaggtcgcccctaagaccgccaaggtgatggaaatcctggaatttgtgaaggccgat
caggtcgatcctatctatctggagagctcttattatgtggcgcccgatgagggcggtgaa
aaggcctacgctcttctcttccaggccctccgcgagtccagctactatgctgtcgcgaag
gtcgccatgcacaatcgagagcacatcatcgtcctgcgccccggctccaagggtatccta
tcccacaccatgtactaccaggacgagatccgccaagtcgaagaattccgcaccgatacc
agcctcgtcaaagacaaggaactggcgatggcgaagatgctgatctcctcgctggaagca
gatttcgagccgcagaaataccacgacacctaccgcgccaacttgaccaaaatgatcgag
gacaaaatcgaaggccgcaatgttgtagccaccccttcggagcacgtcgcccccgtcatc
gacatcatggaagcgctcaaaaagagcctcgccgagaagcgcaagcccgccaccgtcgct
accgccgccgaggaatccggcccgatcgaagtcgcccccaagaagcgcaccccccgcaag
actaaagccggctaa
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