Sulfitobacter sp. S190: K3756_02820
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Entry
K3756_02820 CDS
T10858
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
susq Sulfitobacter sp. S190
Pathway
susq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
susq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
K3756_02820 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
susq03021
]
K3756_02820 (rpoC)
03400 DNA repair and recombination proteins [BR:
susq03400
]
K3756_02820 (rpoC)
Enzymes [BR:
susq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
K3756_02820 (rpoC)
Transcription machinery [BR:
susq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
K3756_02820 (rpoC)
DNA repair and recombination proteins [BR:
susq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
K3756_02820 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
RPOC_hybrid
Apocytochr_F_C
DUF7567
Motif
Other DBs
NCBI-ProteinID:
UWR22950
LinkDB
All DBs
Position
549790..554043
Genome browser
AA seq
1417 aa
AA seq
DB search
MNQELTNNPFNPLTPQKVFDEIKVSLASPERILSWSFGEIKKPETINYRTFKPERDGLFC
ARIFGPIKDYECLCGKYKRMKYRGVVCEKCGVEVTLQKVRRERMGHIELASPVAHIWFLK
SLPSRIGLMLDMTLRDLERVLYFENYVVIEPGLTDLTYGQMMTEEEYMDAQDAYGMDAFT
ANIGAEAIREMLAAIDLEAEADQLREDLKEATGELKPKKIIKRLKVVESFLESGNRPEWM
VMTVIPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPDIIVRNEKR
MLQESVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDFSGRSVIVT
GPELKLHQCGLPKKMALELFKPFIYSRLEAKGLSSTVKQAKKLVEKERPEVWDILDEVIR
EHPVMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCSAFNADFDGDQMAVHVPLSLEAQ
LEARVLMMSTNNVLSPANGAPIIVPSQDMILGLYYTTLERDGMKGEGKVFGTVDEVQHAL
DAGEVHLHSKIKARIKQIDNEGNEVMMRFDTTPGRVRLGALLPLNAKAPFDLVNRLLRKK
EVQQVIDTVYRYCGQKESVIFCDQIMTMGFREAFKAGISFGKDDMLIPETKWDLVEDTRG
QVKDFEQQYMDGLITQGEKYNKVVDAWSKCNDKVTDAMMGSISAERHDENGTEMEPNSVY
MMAHSGARGSVTQMKQLGGMRGLMAKPNGDIIETPIISNFKEGLTVLEYFNSTHGARKGL
SDTALKTANSGYLTRRLVDVAQDCIVRMHDCGTETAITAVAAVNDGEVVASLAERLLGRV
VAEDILRPGTEEVLAAAGSIVDERTSDIIDEAGVASARIRSPLTCDAEEGVCAMCYGRDL
ARGTLVNQGEAVGIIAAQSIGEPGTQLTMRTFHIGGVAQGGQQSFQEAGQAGKIQFENAQ
TLENAQGETMVMGRNMKLLIIDEQGEERANFKVGYGTKLFVSEGQEVARGDKLFEWDPYT
LPIIAEAAGTAKHVDLVSGIAVKDETDDATGMTQKIVIDWRAAPKGNELKPEIILMDKDG
EPLRNDAGNPITYPMSVDAVLSVEDQSEVQAGDIIARIPREGAKTKDITGGLPRVAELFE
ARRPKDHAIIAEIDGYVRFGKDYKNKRRIAIESSEDPDHKVEYMVPKGKHIPVAEGDFVQ
KGDYIMDGNPAPHDILAIMGVEALADYMIDEVQDVYRLQGVKINDKHIEVIVRQMLQKWE
IQESGDTTLLKGEHVDKQEFDAANEKALSKGGRPAKGEPILLGITKASLQTRSFISAASF
QETTRVLTEASVQGKKDKLVGLKENVIVGRLIPAGTGGATQQMRRVAQDRDNVVIEARRI
EAEKAAALAAPEATGADDFVGGDVFDQAPIIDEESRD
NT seq
4254 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaggaactgacaaacaacccgtttaacccgctgacaccgcagaaggttttcgac
gagatcaaggtctccctcgcaagccccgagcgtatcctcagctggtctttcggcgaaatc
aaaaagccagaaaccatcaactaccggacgttcaagcccgagcgtgacggcctgttctgt
gcgcgtatttttggccccatcaaggactacgaatgcctgtgcggcaaatacaagcgcatg
aaatatcgcggcgttgtctgcgagaaatgcggcgtcgaagtcacgctgcaaaaagtccgc
cgcgagcgcatgggccacatcgagctggcctcgccggttgcgcacatctggttcctgaaa
tcgctgccgtcgcgcatcggcctgatgctcgacatgacgctgcgcgatctggaacgtgtg
ctgtactttgaaaactacgtcgtgatcgaaccgggtctgacggatctcacctacggtcag
atgatgaccgaggaagagtacatggacgcgcaggatgcctatggcatggacgcgttcacc
gccaacatcggtgccgaagcgatccgcgaaatgctcgccgccattgatctggaggccgag
gccgaccagctgcgcgaagatctcaaggaagccacgggcgaactgaaacccaagaagatt
atcaagcgcctcaaggtggttgaaagcttcctggaatccggcaaccgccccgaatggatg
gtcatgaccgtcattccggtgatcccgccggaactgcgtccgctggtgccgctggatggc
ggccgtttcgcgacatccgatctcaacgatctgtaccgccgcgtgatcaaccgcaacaac
cgtctgaagcgtctgatcgaactgcgtgcacccgacatcatcgtgcgcaacgaaaagcgg
atgctgcaggaatccgtcgatgcgctcttcgacaacggtcgccgtggccgcgtgatcacc
ggtgccaacaagcgcccgctgaaatcgctgtccgacatgctcaagggcaagcagggtcgc
ttccgccagaaccttctgggcaaacgcgtcgacttctcgggtcgttcggtcatcgtgacc
ggtccggaactgaaactgcaccagtgtggtctgcccaagaagatggcgctggagctgttc
aagccgttcatctactcgcggctcgaggccaaaggcctcagctccaccgtcaagcaggcg
aaaaagctggtcgaaaaagagcgtcccgaagtgtgggatatcctcgacgaggtcatccgc
gaacaccctgtcatgctgaaccgtgcgcctacgctgcaccggttgggcattcaggcgttc
gaacctgtcctgatcgaaggcaaggcgatccagcttcacccgctcgtctgttcggccttc
aacgccgactttgacggtgaccagatggccgtgcacgtgccgctctcgctcgaagcgcag
ctggaagcacgcgttctgatgatgtccacgaacaacgttctgtcgcccgccaacggcgcg
ccgatcatcgtgccatcgcaggatatgatcctgggtctgtactacacgaccctggagcgt
gacggcatgaagggagaaggcaaggtctttggcaccgtcgacgaagtgcagcacgcgctt
gacgccggtgaggtgcacctgcactccaagatcaaggcccggatcaagcagatcgacaac
gaaggcaacgaagtgatgatgcgctttgacacgacccccggtcgtgtgcgtctgggcgcg
cttctgccgctcaacgcgaaggcgccgttcgatctggtcaaccgtctgctgcgcaagaag
gaagtgcagcaggtgatcgataccgtctaccggtattgcggccagaaagagagcgtcatc
ttctgtgaccagatcatgaccatgggcttccgcgaagcgttcaaggcgggcatctcgttc
ggcaaggacgacatgctgatccccgaaaccaaatgggatctggtcgaggacacacgcggt
caggtgaaagacttcgaacagcagtacatggacggcctgattacccagggcgaaaagtac
aacaaggtcgtcgatgcctggtccaagtgtaacgacaaggtgaccgacgccatgatgggc
tccatctcggcggaacgtcacgacgagaacgggaccgaaatggaaccgaactcggtctac
atgatggcccactccggcgcgcgtggctctgtcacccagatgaaacagctgggcggcatg
cgcggcctgatggccaagccgaacggcgacatcatcgagacgccgatcatctcgaacttc
aaggaaggtctgaccgttcttgaatacttcaactcgacccacggcgcccgtaagggtctg
tcggataccgctctgaagacggcgaactcgggctacctgacccgccgtctggttgacgtg
gcgcaggactgcatcgtgcgcatgcacgactgtggcaccgaaaccgcgatcactgccgtg
gcagccgtcaacgacggtgaagtggtggcttcgctggccgagcgtctgctgggccgtgtc
gtggccgaggacatcctgcgccccggcaccgaagaagtgctggccgctgccggttcgatc
gtggacgagcggacctcggacatcatcgacgaagcgggtgtggcctcggcccggatccgc
agcccgctgacctgtgacgccgaagagggggtctgcgccatgtgctacggccgtgacctc
gcacgcggcacgctggtcaaccagggcgaagctgtcggcatcatcgccgcacagtcgatc
ggtgaacccggtacacagttgacgatgcggaccttccacatcggcggcgttgcacagggt
ggccagcagtccttccaggaagcgggccaggccggcaagatccagttcgagaacgcgcaa
acgctcgagaacgcgcaaggcgaaaccatggtcatgggccgcaacatgaagttgctcatc
atcgatgagcagggcgaagaacgcgccaacttcaaagtgggctacggcaccaagctgttt
gtatccgaaggtcaggaagtggcccgcggcgacaagctgtttgaatgggatccctacacg
ctgccgatcatcgcggaggccgcaggtacggccaagcacgttgatctggtgtcgggcatc
gccgtcaaggacgaaaccgatgacgcaacaggcatgacccagaagatcgtgatcgactgg
cgtgccgcacccaagggcaatgaactcaagccagagatcatcctgatggataaagacggc
gagccgctgcgcaacgacgcgggcaacccgatcacctatccgatgtccgtggatgcggtc
ctgtccgtcgaagaccaatcggaggttcaggccggtgacatcatcgcgcgcatcccgcgt
gaaggtgccaagaccaaggacatcaccggtggtctgccgcgtgtggccgaactctttgag
gcacgtcgccccaaggaccacgccatcatcgcggaaatcgacggctacgtgcggttcggc
aaggactacaagaacaagcgtcgtatcgcgatcgagtcgtccgaagatccggatcacaag
gtcgagtacatggtgcccaaggggaaacacatccccgttgccgaaggcgacttcgtgcag
aagggtgactacatcatggacggtaaccccgcgccgcacgacatcctcgccatcatgggt
gtcgaagcactggcggattacatgatcgacgaggttcaggacgtctatcgcctgcaaggt
gtgaaaatcaacgacaagcacatcgaagtcatcgtgcgccagatgctgcagaagtgggag
atccaggaatccggagacaccacgctgctcaagggcgaacacgtcgacaagcaggaattc
gacgcggccaacgaaaaggccctgtcgaaaggcggtcgtccggccaagggcgaaccgatc
ctgctgggcatcaccaaggcgtcgctgcaaacccgcagcttcatctcggcggcgtccttc
caggaaacgacccgcgttcttaccgaagcctccgtgcagggtaagaaagacaagctggtc
ggcctgaaagagaacgtgatcgttggtcgtctgatccctgcgggcaccggtggggcaacc
cagcagatgcgccgtgtggctcaggatcgcgacaatgtcgtaatcgaagcgcgccggatc
gaagccgaaaaagcggctgcgctggcagcgcccgaagcgacgggtgcggatgacttcgtc
ggtggcgacgtctttgaccaggcgccgatcatcgatgaggaaagccgcgattga
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integrated database retrieval system
