Sulfitobacter sp. S190: K3756_06415
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Entry
K3756_06415 CDS
T10858
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
susq Sulfitobacter sp. S190
Pathway
susq03420
Nucleotide excision repair
susq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
susq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K3756_06415
03430 Mismatch repair
K3756_06415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
susq03400
]
K3756_06415
Enzymes [BR:
susq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K3756_06415
DNA repair and recombination proteins [BR:
susq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K3756_06415
MMR (mismatch excision repair)
Other MMR factors
K3756_06415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
AAA_11
DapB_N
Motif
Other DBs
NCBI-ProteinID:
UWR23598
LinkDB
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Position
1242546..1245125
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AA seq
859 aa
AA seq
DB search
MSSFDENDAFEGASLSARAMAARPQPYLDGLNPAQREAVERLDGPVLMLAGAGTGKTRAL
TARIVHLLNTGRAQPNEILAVTFTNKAAREMKNRVGAMLGQSADGMRWLGTFHAICVKLL
RRHAELAGLKSNFTILDTDDQLRLLKQLISAEGIDDKRWPARMLSGIIDDWKNRAITPDK
VPSADAGAYNHKGVEIYAAYQARLKALNACDFGDLLLHMVTIFQTHDDVLAQYQRWFKHI
LVDEYQDTNVAQYLWLRLLASGHKNICCVGDDDQSIYGWRGAEVGNILRFEKDFPGAHVV
RLEQNYRSTPHILAAASGVIAGNAGRLGKTLWTEAQEGEKVRLIGHWDGEEEARWIGEEI
EDAHSGRGKYRFRDNVRSSDSQQESERRAKGGTVSKHPQGDIHEVNLKRSQTLSEAGRDN
IPVPFGFGLDEIAILVRASHQMRAFEDRFLTIGLPYRVIGGPRFYERMEIRDAMAYFRVV
TSPDDDLAFERIVNTPKRGLGDKAQQKIQMTARAHGTNLVEGARILLADNGLTGKGAAQL
RLLIDGIERWSGMLRGPRIEVQDDSVIDTGPTPAERVAYGPPEVSHVELAEIILDESGYT
GMWQNDKTPEAPGRLENLKELVKALDQFENLQGFLEHVSLIMDNEQEDAAEKVSIMTLHA
AKGLEFPAVFLPGWEDGLFPSQRSMDESGLKGLEEERRLAYVGITRAEEICTISFVGNRQ
IFGQWQSAMPSRFIDELPEAHVDVLTPPGLYGGGYGAAMPKSTLHEQAAEANVYNSPGWR
RLQARSGQRGMTQPAESRNMTIDASAVSSFTVGERVFHQKFGYGSIIGVEGDKLEVAFEK
AGTKKVVGRFLTGADDVPF
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgagcagctttgacgaaaacgacgccttcgagggcgcttcgctgtcggcccgcgcgatg
gcggcgcgcccgcagccttatctggacggtctcaaccccgcgcagcgcgaggcggtcgag
aggttggatggtcctgtgctgatgctggccggggcgggcacgggcaagacgcgcgccctg
acggcgcggatcgtgcatctgctcaataccggtcgggcccagcccaacgagattctggcc
gtgacgtttaccaacaaggccgcgcgcgagatgaagaaccgtgtgggcgcgatgctgggc
cagtcggcggacgggatgcgctggctgggcacgttccacgcgatctgtgtcaaactgttg
cggcggcacgcggaactggcgggattgaaatcgaatttcaccattctggacaccgacgat
cagctgcggctgctcaagcagttgatttcggcggaaggcatcgacgacaaacgctggcct
gcgcggatgctgtcggggatcatcgacgactggaagaaccgcgcgatcacgcccgacaag
gtgccaagcgcggatgcgggggcctataatcacaagggcgtcgagatttacgccgcctat
caggcgcggctcaaggcgctcaacgcctgcgatttcggtgatctgctgctgcatatggtc
acgattttccagacccacgacgatgtgctggcgcagtaccagcgctggttcaaacacatc
cttgtggatgaataccaggataccaacgtggcgcagtacctgtggctgcggctgctggcc
agcgggcataagaacatctgctgcgtgggggacgacgaccagtcgatctatggctggcgc
ggggcggaagtgggcaatatcctgcggtttgaaaaggattttcccggtgcccacgtggtc
cggctggagcagaactaccgctccaccccgcatattctggccgcggcatccggtgtgatc
gcgggcaatgcgggccgcttgggcaagacgttgtggaccgaggcgcaggagggcgagaag
gtccggctgatcggtcactgggatggcgaggaagaggcgcgctggattggcgaggagatc
gaggacgctcattctgggcgaggaaaatacaggttccgcgacaacgtacgctcaagcgat
tcacagcaagagtctgaacgtagagcgaaaggtggtacagtttctaagcacccacagggc
gacatccatgaggtgaatctaaagcgtagccaaacattgagcgaagccggacgagataat
atacctgttccatttggctttggattagacgaaattgccattcttgtgcgcgccagccac
cagatgcgcgcgttcgaggaccggttcctgaccatcgggttgccctaccgcgtgatcggc
ggcccgcggttttacgagcggatggagatccgcgacgcgatggcgtatttccgggtggtg
acctcgcccgacgatgatctggcgttcgagcgcattgtgaacacgccaaaacgcgggttg
ggtgacaaggcgcagcagaagatacagatgacggcgcgcgcgcatggcacgaaccttgtg
gagggcgcgcggatcctgctggccgacaacgggctgaccggcaagggcgcggcgcagctg
cggttgttgatcgacgggatcgagcggtggtcggggatgctgcgggggccgcgcatcgaa
gtgcaggacgattcggtgatcgacaccgggccgacgcctgccgagcgggtcgcgtacggc
ccccccgaagtcagccacgtggagcttgccgagatcatcctcgatgagagcggctatacg
gggatgtggcagaacgacaagacgccggaggcgcccggacggctggagaacctcaaggag
ctggtcaaggcgctcgaccagttcgagaaccttcagggatttctcgagcatgtcagcctg
atcatggacaacgagcaggaagatgccgccgagaaagtgtcgatcatgacgttgcacgcg
gccaaggggctggaatttccggcggtgtttctgcccggttgggaggacggacttttcccg
tcgcagcggtcgatggatgaaagcggtctcaaggggctggaggaggaacgacggctggcc
tatgtggggatcacgcgggccgaggaaatctgtaccatttcctttgtcggcaaccgccag
atattcgggcaatggcagtcggcgatgccgtcgcggttcattgacgagctgcccgaggcg
catgtcgacgtgctgacgccgccggggctttacggtgggggatacggtgccgcgatgccc
aaaagcacgctgcacgagcaggccgcggaggcgaatgtctataactcgccgggttggcgg
cggttgcaggcgcggtcgggccagcggggcatgacccaaccggcagaatcgcgcaacatg
accatcgatgcgtcagcggtgagcagcttcaccgtcggcgagcgggtgttccaccagaag
ttcggctatgggtcgatcatcggggtggagggcgacaagctggaggtcgcgttcgaaaag
gcggggaccaagaaggtcgtcggccgctttttgaccggtgcggacgacgttccgttctaa
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