Sulfitobacter sp. S190: K3756_16325
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Entry
K3756_16325 CDS
T10858
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
susq Sulfitobacter sp. S190
Pathway
susq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
susq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K3756_16325 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
susq03019
]
K3756_16325 (pnp)
03016 Transfer RNA biogenesis [BR:
susq03016
]
K3756_16325 (pnp)
Enzymes [BR:
susq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
K3756_16325 (pnp)
Messenger RNA biogenesis [BR:
susq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
K3756_16325 (pnp)
Transfer RNA biogenesis [BR:
susq03016
]
Prokaryotic type
tRNA degradation factors
K3756_16325 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
UWR22214
LinkDB
All DBs
Position
3292361..3294496
Genome browser
AA seq
711 aa
AA seq
DB search
MFNEVKKSMQWGEETLTLETGKVARQADGSVIVTYGETSVMANVTFARQQKPGQDFFPLT
VHYNEKYYAAGKIPGGFFKREARPTEKETLTSRLIDRPIRPLFVPGFKNEVLVMCTVLSH
DLVNDPDMVAMIAASAALTISGAPFMGPIAACRVGFEGGDYILNPEIDDMQDLRLNPDQR
LDLVVAGTKDAVMMVESEAYELTEAEMLGAVKFAHEQIQPVIDLIIDLAEDAAKEPFDFQ
PVDYSDLFEAVKSAGEEEMRAAFAIADKQERTAAVSAARDTIKGKLSDEQLEDANLGSAM
KKLEASILRGDVVKTGTRIDGRKTDEIRDIVSQTGLLPRTHGSALFTRGETQGLVVTTLG
TGDDEQFIDALHGNFKSNFLLHYNFPPYSVGEVGRVGPPGRREIGHGKLAWRALQAVLPA
ATDFPYTIRVVSEITESNGSSSMASVCGGSLSMMDAGVPLKSAVAGVAMGLILEEDGSYA
ILSDILGDEDHLGDMDFKVAGTENGITSLQMDIKVAGITPEIMEKALAQAKDGRMHILGE
MSKAITGAQEFSVHAPRIETMQVPTDKIREVIGSGGKVIREIVEVSGAKVDINDDGIIKI
ASPNGDAIKKAYDMIHSIVAEPEEGAVYTGTVVKIVDFGAFVNFFGKRDGLVHVSQIENR
RLNHPSDVLKEGQEVKVKLLGFDDRGKVRLSMKVVDQETGEEVKKEEKADD
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacgaagtgaagaaaagcatgcagtggggcgaagaaacgctcacactcgaaaca
ggtaaggttgcacgccaggcagacggctcggtgatcgtgacgtacggcgaaacctccgtc
atggccaacgtgacattcgcccgccagcaaaaacccggtcaggatttctttccgctgacc
gtacactacaacgaaaaatattacgctgcgggtaaaatccccggcggtttcttcaagcgt
gaggcccgccccaccgagaaagaaacactcaccagccgccttatcgaccgtccgatccgc
ccgctgttcgtccccggcttcaaaaacgaagttctggtgatgtgcaccgtgctgagccac
gatctggtcaatgaccccgacatggttgcgatgatcgccgcctccgccgcgctgaccatc
tccggcgcgccgttcatgggtccgatcgcggcctgccgcgtgggcttcgagggtggtgac
tacatcctgaaccccgaaatcgacgacatgcaggacttgcgcctgaaccccgatcaacgc
cttgatctggttgtcgcgggcaccaaagacgccgtgatgatggtcgaatccgaagcctac
gagctgacagaagccgaaatgctgggtgcggtgaaattcgcgcacgagcaaatccagccc
gtcatcgacctgatcatcgatctggccgaagatgccgcgaaagagccgttcgacttccag
cccgttgattattccgacctcttcgaggccgtgaaatccgcaggcgaagaagaaatgcgc
gccgctttcgccatcgccgacaagcaagaacgcaccgcagccgtttctgccgcccgcgac
accatcaagggcaagctgtcggacgagcaactggaagacgccaacctcggctccgccatg
aaaaagctcgaagcctccattctgcgcggcgacgttgtcaaaactggcacgcggatcgac
gggcgcaaaaccgacgaaatccgtgacatcgtcagccagacaggcctgctgccccggacc
cacggctccgcgctgttcacccgtggtgaaacgcaaggtctggtcgtgaccacattgggc
accggcgacgacgagcagttcatcgacgcgctgcacggcaacttcaaatccaacttcctg
ctgcactataacttcccgccctattcggttggcgaagtgggtcgcgtgggccctcccggc
cgccgcgaaatcggtcacgggaaactggcgtggcgcgcgctgcaggctgtcctgcccgcg
gcaaccgacttcccctacaccatccgcgtcgtgtccgagatcactgaatcgaacggctcc
tcctcgatggcgtcggtctgcggtggctccttgtcgatgatggacgcgggcgtgccgctg
aaatccgccgtggccggtgttgccatgggtctgatcctcgaagaggacggctcctacgcg
attctgtccgacattctgggtgacgaagaccacctgggcgacatggacttcaaagtggcg
ggtaccgaaaacggcattacgtcgctgcagatggatatcaaggtcgcaggcatcacgccc
gagatcatggaaaaagcgctggcacaggccaaagacggccgcatgcacatccttggcgaa
atgtccaaagccatcaccggcgcgcaggaattctccgtgcacgcaccgcgcatcgaaacc
atgcaggtgccaacggacaaaatccgcgaagtcatcggttcgggtggcaaggtcatccgc
gaaatcgtcgaagtgtccggcgccaaggtcgacatcaacgacgacggcatcatcaagatc
gcaagcccgaacggcgacgcgatcaagaaagcctacgacatgatccactccatcgtggcc
gaacccgaagagggcgcagtctacaccggtacagtggtcaagatcgtcgatttcggtgcc
ttcgtgaacttcttcggaaaacgcgacggtctggtgcacgtgtcccagatcgagaaccgc
cgcctgaaccacccttcggacgttctgaaggaaggtcaggaagtcaaagtcaaactgctc
ggctttgacgaccgcggcaaggtgcgcctgtcgatgaaagtggtcgatcaggaaaccggc
gaagaagtcaaaaaagaagagaaagcggacgactaa
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