Sulfitobacter sp. S190: K3756_16825
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Entry
K3756_16825 CDS
T10858
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
susq Sulfitobacter sp. S190
Pathway
susq03030
DNA replication
susq03410
Base excision repair
susq03420
Nucleotide excision repair
susq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
susq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K3756_16825 (polA)
03410 Base excision repair
K3756_16825 (polA)
03420 Nucleotide excision repair
K3756_16825 (polA)
03440 Homologous recombination
K3756_16825 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
susq03032
]
K3756_16825 (polA)
03400 DNA repair and recombination proteins [BR:
susq03400
]
K3756_16825 (polA)
Enzymes [BR:
susq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K3756_16825 (polA)
DNA replication proteins [BR:
susq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
K3756_16825 (polA)
DNA repair and recombination proteins [BR:
susq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
K3756_16825 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K3756_16825 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
UWR22306
LinkDB
All DBs
Position
3389833..3392625
Genome browser
AA seq
930 aa
AA seq
DB search
MAFGKGHHLHLIDGSAFIFRAYHALPPLTRKSDGLPIGAVSGFCNMLQRYVEGNTGADAP
THVAVIFDKGSHTFRNDMYDQYKANREAMPEDLRPQIPLTREATIAFNIACEEMEGFEAD
DMIATLAVQARAAGGRCTIISSDKDLMQLVGGGVEMYDAMKNNRIDRDGVHEKFGVFPEG
VVDVQALAGDSVDNVPGAPGIGIKTAALLINEYGDLETLLDRAEEIKQPKRRQTLIEHRA
QIELSKRLVQLDEQTPLKFTIDDLEVREPDPDKLLAFLTKMEFRTLTKRIADALKVEAPA
IPEPAPAEDAPQVEAVPFDKATYTRVGDAEALQEWIDKIYDRGHVAVDTETTGLDEMTAD
LVGVSLCVDAGEACYIPLIHKANRGDDLFGSDDLAEGQMNTEDALRMLTPMLEDPTILKI
GQNMKYDAKIFAQIGITVAPIDDTMLMSYAQHAGLHGHGMDTLSERYLNHTPIPIKPLLG
TGKSAITFDKVPLEDAVPYAAEDADITMRLWQTLKPGLHRAQTTRVYETLERPLVPVLAA
MERSGVKVDRDTLSRMSNAFAQKMAGLEDEIHTLAGRSFNVGSPKQLGEILFDEMGIEGG
KKGKTGAYATGADVLEDLATEHDLPARVLDWRQLSKLKSTYTDALQDHINADTGRVHTSY
SITGASTGRLASTDPNLQNIPIRTEEGRRIREAFVAEEGKTLVALDYSQIELRLLAHIAD
IPALKQAFAEGQDIHAMTASEMFDVPLDEMTSDIRRQAKAINFGVIYGISGFGLARNLRI
PRAEAQGFIDRYFERFPGIRTYMDDTKAFAKEHGFVQTLFGRNIHTPEIASKGPRAGFAA
RAAINAPIQGTAADVIRRAMVRMPDAIAELPATMLLQVHDELLFEVEAGAEEDLISTARA
VMENASDPVVKLDVKLSVDAGTGQNWAQAH
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggcattcggcaaagggcaccacctgcatctgatcgacggatcagcctttatctttcgg
gcctatcacgccctgccgccactgacgcgcaagtcggacggcctgccgattggtgcggta
tcaggcttttgcaacatgctgcagcgttacgtcgaagggaacaccggcgcagatgctcca
acgcacgtcgcggtgattttcgacaagggcagccacacctttcgcaacgacatgtacgac
cagtacaaggccaaccgcgaagccatgcccgaagacctgcgcccccagattcctctgacc
cgggaggcgacaatcgccttcaacatcgcgtgcgaggaaatggaaggttttgaggccgac
gatatgattgcgacgcttgccgttcaggcgcgtgcagccggaggccgctgtaccattatc
agttccgacaaggacctgatgcagttggtcggcggcggtgtcgagatgtacgatgccatg
aaaaacaatcgcatcgaccgcgatggcgtgcacgaaaaattcggtgtcttccccgaaggc
gttgtcgatgtgcaggccttggcgggcgattcggtggacaatgtgccgggtgcgccgggc
atcgggatcaagacagccgcgctgcttatcaacgaatacggcgatctggaaacccttctg
gaccgcgccgaagagatcaagcagcccaagcgccgccaaaccctgatcgagcatcgcgca
cagatcgaattgtcgaaacggctggtgcagctcgatgaacagacgcccctgaagtttacc
atcgacgatctggaggtgcgcgagcccgatccggacaaattgctcgcgtttctgacaaag
atggagttccgcacgctgaccaagcgcattgccgacgcgctcaaggtcgaggcccccgcg
atacccgaacctgcaccggcggaagacgcgccgcaggtcgaagcagttccgtttgacaaa
gccacctatacccgtgtcggcgatgccgaggcgctgcaggagtggatcgacaaaatctat
gatcgcgggcatgtggccgtcgatacggaaaccaccggtcttgacgagatgactgccgat
ctggtgggcgtatccctttgcgtggatgccggcgaggcgtgctatatcccgctcattcac
aaggccaaccgcggcgatgatctgtttggatccgatgatctggccgaggggcagatgaac
accgaagacgcgttgcggatgctgacgccgatgctcgaggatccaacgatcctgaagatt
ggccagaacatgaagtacgacgcgaagatctttgcccagatcggcatcacggtcgcgcct
atcgatgacacgatgctgatgtcctacgcccaacacgcaggattgcacggtcacggcatg
gacaccctgtctgagcgatacctcaaccacacaccaattccgatcaaaccgcttctggga
accggaaaatcggccatcacctttgacaaggttccgttggaagacgcggtgccttatgcc
gccgaggatgcggatatcacgatgcggctgtggcagacgttgaagccggggctgcaccgc
gcacagacgacgcgggtgtacgaaacgctcgaacgtccccttgtcccggttctcgcagcg
atggagcgttcgggggtcaaggttgaccgcgacacgctgagccgcatgtcgaatgcgttt
gcccagaagatggccggtctggaagacgaaattcatacactcgcaggccgcagctttaat
gtcggctctcccaagcagttgggtgaaatcctgtttgacgaaatgggcattgaaggcggc
aagaaaggcaagacaggagcctatgcgacaggcgccgacgtgctagaggatttggcgacg
gagcatgatctgcccgcgcgcgtgcttgactggcgtcagctgtcgaagctgaaatcgacc
tatacggacgccttgcaagatcacatcaatgccgacacgggccgcgttcacacgtcttat
tcgatcaccggcgcgtcgacaggccggctcgcgtcaaccgaccccaatctccagaacatc
ccgatccgcaccgaagaaggccgccgcatccgcgaagcctttgtggcggaagaaggcaaa
acgcttgttgcattggactacagccagatcgagctgcgcctgctggcgcatattgccgat
atccccgcgcttaagcaggcgttcgcggaggggcaggacatccacgccatgaccgcatcg
gaaatgttcgatgtaccgctcgatgaaatgacatcggacatccgccgacaggccaaggcg
atcaatttcggggtgatctacggcatttccggcttcgggctggcccgcaacctgcgtatc
ccgcgcgccgaagcgcaaggatttatcgaccgctatttcgaacggtttcccggcattcgc
acctacatggacgacaccaaggctttcgccaaggaacacgggttcgtgcaaacgctgttc
gggcgcaatatccacacaccggaaattgcttcaaaaggaccgcgtgccggatttgccgcg
cgcgccgcgatcaacgcgcccatccaaggtaccgccgcggacgtcatccgccgggcgatg
gtgcggatgcccgacgccatcgccgaacttcccgcgacaatgttgctgcaggtccatgac
gagctgctcttcgaagtcgaggcaggcgcagaggaagacctgatctccacggcacgcgcc
gtcatggaaaacgcctccgacccggtggtaaagctggacgtgaaattgtcggtcgatgca
ggcacgggtcaaaactgggcgcaagcgcactga
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