Sutterella faecalis: FG381_08370
Help
Entry
FG381_08370 CDS
T06027
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
sutk
Sutterella faecalis
Pathway
sutk03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sutk00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FG381_08370 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sutk03021
]
FG381_08370 (rpoB)
03400 DNA repair and recombination proteins [BR:
sutk03400
]
FG381_08370 (rpoB)
Enzymes [BR:
sutk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FG381_08370 (rpoB)
Transcription machinery [BR:
sutk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FG381_08370 (rpoB)
DNA repair and recombination proteins [BR:
sutk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FG381_08370 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
DUF3825
PP_kinase_C
Motif
Other DBs
NCBI-ProteinID:
QDA54957
UniProt:
A0ABX5VG97
LinkDB
All DBs
Position
2003419..2007582
Genome browser
AA seq
1387 aa
AA seq
DB search
MSYSFTEKKRIRKSFASRPSVLEVPSLLDIQLRSYEDFLQANVKPAARSSNLGLQAAFTS
IFPITSNNGYARLRFAGYNLAEPEFDVAECQLRGLTYCSRLRAKIRLEIYDREAAQPETI
KEIRENDVYMGEIPLMTEKGSFIVNGTERVIVSQLHRSPGIFFEHDKGKTHSSGKLLFSA
RVIPYRGSWLDFEFDAKDILYFRVDRRRKMPGTILLKAIGYSVEDILARFFAFDSFQLLK
SGAKLPVVPERLKGQTMSFDITDGEGKVIVPHDKRITAKHLRDISKAGVTTIAVPDDYLL
GRVLAKNIVDAQTGEVIAQANEEITESTLEHLRASRVRKIETLFTNELDHGAYISNTLRL
DDTPDQFSARVAIYRMMRPGEPPTEEAVETLFDRLFFDADAYDLSRVGRMKVNARFGRPS
AEGARTLTKEDIVDTMALLVALRNGQDDVELVDEKGEKRICPVNGVDDIDHLGNRRVRCV
GELAENQFRAGLVRVERAVKERLNQAESDGLTPQDLINSKPISAAIREFFGSSQLSQFMD
QTNPLSEITHKRRISALGPGGLTRERAGFEVRDVHSTHYGRVCPIETPEGPNIGLINSLA
LYARLNEYGFLETPYRKVVDGVATKEIHYLSAIEEGKYIIAQANAEMDDHGRLTQELVSA
RDNGETILASPERIQYMDVAPAQIVSCAAALIPFLEHDDANRALMGANMQRQGVPCLRPE
KPVVGTGIERTVAVDSKTAVQARRGGVVDYVDANRVVIRVNDEESVAGETGVDIYNLQKF
TRSNQSTNINQRPIVVKGDRVAVGDVLADGASTDTGELALGQNMLIAFMPWNGYNYEDSV
LISERVVADDRYTSIHIEELSVVSRDTKLGPEEITRDISNLSENQLSRLDDSGIVFIGAE
VKAGDVLVGKVTPKGETQLTPEEKLLRVIFGEKASDVKDTSLRVPSGMTGTVIDVQVFTR
DGVKRDKRAESIIAEALKRYRRDLDDQLRIVERDSFDRLRRQLAGHKVVSTMKLEGLPAD
CVLTPEFLATMQGYDLFDLRMEEEAAQHYIDLTKQAIEHTREDNARKFDIKNDKLTRGDE
LPPGVLKMVKVYIAERRRLQPGDKMAGRHGNKGVVSKICPVEDMPYMADGRPADIVLNPL
GVPSRMNIGQVLEVHLGWAAKGIGWRIEQMLKTEQVRQIRAFLNEVYNRTGKHEDLDSLT
DEELMRMARNLQNGVPFATPVFDGATEEQIRMMLDLAFPDEEAARLQLTPSKTQATLYDG
RTGDAFERPVTVGYMHYLKLHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEV
WALEAYGAAYVLQEMLTVKSDDVNGRTKVYENIVKGEHKIEAGMPESFNVLVKEIRSLGI
DIDLVKN
NT seq
4164 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtactcgttcactgaaaagaagcgcatccgcaagagcttcgcctctcgcccgagc
gtccttgaagtgccttccctgcttgatattcagcttcgttcgtacgaagacttcctgcag
gccaacgtgaagcccgctgcgcgcagcagcaatctcggccttcaggccgccttcacctcg
atcttcccgatcacgagcaacaatggttacgcccgtctgagattcgcaggctacaacctt
gccgaacctgagttcgacgtggctgagtgccagctgcgcggtcttacctactgctcgcgt
cttcgcgccaagatccgtcttgaaatctacgatcgtgaagccgctcagccggaaacgatc
aaggaaatccgtgagaacgacgtctacatgggggaaatccccctgatgacggaaaagggt
tcgttcattgtgaacggcacggaacgcgtcattgtttcccagctgcaccgttctcccggc
atcttcttcgagcatgacaagggcaagacccattcgtcgggcaagctcctcttctccgct
cgcgtcattccctaccgcggttcgtggcttgactttgaattcgacgcgaaggacatcctt
tacttccgcgtcgaccgccgccgcaagatgcccggcacgatcctcctgaaggccatcggc
tattcggtcgaggacatcctcgcgcgcttctttgctttcgacagcttccagctcctgaag
agcggagccaagcttcccgtcgttcctgaacgactcaagggacagacgatgtcgttcgac
attacggacggcgaaggcaaggtcattgttccgcatgacaagcgcattactgccaagcat
cttcgcgatatttcgaaggctggcgtgacgacgatcgcggttcctgacgattacctcctc
ggacgcgtcctcgccaagaacattgtcgacgctcagacgggcgaagtcattgctcaggcc
aatgaggaaatcacggaatcgacgctcgaacatctgcgggcgtcccgcgtgcgcaagatc
gaaacgctctttacgaatgagctcgatcatggcgcctatatttccaacacgctgcgtctt
gacgatacgccggatcagttctccgcccgcgttgcgatctaccgcatgatgcgtccgggt
gaaccgcctacggaagaagccgttgaaacgctcttcgaccgcctcttctttgatgccgat
gcgtatgatctttcgcgcgtcggccgcatgaaggtcaatgctcgtttcggccgtccctcc
gccgaaggcgcccgcacgcttacgaaggaagacatcgttgatacgatggctcttctggtt
gctctgcgcaacggccaggacgatgtcgagctcgtcgacgaaaaaggtgaaaagcgtatt
tgcccggtgaacggcgtcgacgacatcgaccacctcggcaaccgtcgcgtccgctgcgtc
ggcgaactcgccgagaatcagttccgcgctggtcttgtccgcgttgagcgtgccgtcaag
gagcgtctcaaccaggctgaaagcgacgggctcacgccgcaggatctcatcaattcgaag
cccatctcagctgcgattcgtgagttcttcggttcgagccagctctcgcagttcatggac
cagacgaacccgctttcggaaattacgcataagcgccgtatttccgcgcttggtccgggc
ggcctcacgcgtgaacgcgcaggcttcgaagtgcgcgacgtgcattcgacccactacggc
cgcgtctgcccgattgaaacgcctgaaggtccgaacatcggtctgatcaactcgctcgct
ctttatgcgcgcctcaacgagtacggcttccttgagacgccgtaccgcaaggttgtggac
ggcgttgcgacgaaggaaattcactacctttccgccattgaggaaggcaagtacatcatc
gctcaggccaacgccgagatggatgatcacggccgcctcactcaggaactcgtttctgcc
cgcgacaacggcgaaacgattctggcttcgcctgagcgcattcagtacatggacgtcgcg
ccggcgcagatcgtttcctgcgctgctgcgcttattccgttccttgaacacgatgacgcg
aaccgtgctctgatgggcgcgaacatgcagcgtcagggcgtgccctgcctgcgtcctgag
aagcctgtcgtcggtacgggcatcgaacgtacggttgcggttgactcgaagacggctgtt
caggcacgccgcggcggtgtggttgactatgtcgacgccaaccgcgtggtgattcgcgtg
aacgacgaggaatcggtggccggtgaaaccggtgtggacatctacaacctgcagaagttc
acccgttccaaccagtcgaccaatatcaatcagcgtccgatcgttgtgaagggcgatcgc
gtggcggttggcgatgtgctcgccgacggcgcttcgaccgatacgggtgaactcgctctc
ggccagaacatgctgatcgcgttcatgccgtggaacggctacaactacgaagactcggtg
ctcatcagcgagcgcgtggttgccgacgaccgctatacctcaatccacatcgaggagctc
tctgtcgtttcccgcgatacgaagctcgggcctgaggaaatcacccgcgacatttcgaac
ctctcggaaaaccagctctcccgtcttgatgattccggcatcgttttcatcggcgctgaa
gtcaaggctggcgatgtgctcgtcggcaaggtaacgccgaagggcgaaacgcagctcacg
ccggaagaaaagctcctgcgcgtgattttcggcgagaaggcttcggatgtgaaggatacg
tcgctgcgcgttccgtccggcatgaccggtacggttatcgacgtgcaggtcttcacccgc
gacggcgtgaagcgcgacaagcgtgcggaaagcatcattgccgaagcgctcaagcgttat
cgccgcgacctcgatgaccagctgcgcattgttgagcgcgactccttcgaccgtctgcgt
cgccagcttgccggccacaaggtcgtgagcacgatgaagctcgagggtcttcctgccgac
tgcgtgctgacgcctgaattcctggccaccatgcagggctacgatctctttgatctgcgc
atggaagaggaagctgctcagcactacattgatctcacgaagcaggcaatcgagcacacg
cgcgaagacaatgcccgcaagttcgatatcaagaacgacaagctcacgcgcggcgacgag
ctgcccccgggcgtgctcaagatggtgaaggtgtacatcgctgaacgccgtcgtctgcag
cccggcgacaagatggccggccgtcacggtaacaagggcgtggtctccaagatctgcccg
gttgaggatatgccgtacatggccgacggtcgtcccgccgacatcgttctgaatccgctc
ggcgtgccgtctcgtatgaacatcggtcaggtgcttgaagttcacctcggctgggccgcg
aagggcatcggctggcgcattgaacagatgctcaagaccgagcaggttcgtcagatccgt
gcgttcctcaatgaggtttacaaccgtaccggcaagcacgaagatctcgacagccttacg
gatgaagagctcatgcgcatggctcgcaatctgcagaacggcgtgccgtttgccacgccg
gtctttgacggcgctacggaagagcagattcgcatgatgcttgacctcgccttcccggat
gaggaagccgctcgtctgcagctcacgccttcgaagacccaggcgaccctttatgacggt
cgtacgggtgatgctttcgaacgtccggtgaccgtgggctacatgcactacctgaagctt
caccacctcgtcgacgacaagatgcatgcgcgttccacgggcccgtactcgctcgtcacg
cagcagcctctgggcggcaaggcgcagttcggcggccagcgcttcggcgaaatggaagtc
tgggcgcttgaagcttacggcgcggcttacgtgctgcaggaaatgcttaccgtcaagtcc
gacgatgtcaacggccgtacgaaggtttacgaaaacatcgtcaagggcgagcacaagatc
gaagcgggcatgcccgaatccttcaacgtgctcgtgaaggaaatccggtcgctcggcatc
gacatcgacctcgtcaagaactaa
DBGET
integrated database retrieval system
