Suttonella sp. R2A3: L0B52_00195
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Entry
L0B52_00195 CDS
T07824
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
sutr
Suttonella sp. R2A3
Pathway
sutr02020
Two-component system
sutr02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sutr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
L0B52_00195 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
L0B52_00195 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sutr03021
]
L0B52_00195 (rpoN)
Transcription machinery [BR:
sutr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
L0B52_00195 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_Crp_2
HTH_17
HTH_3
Motif
Other DBs
NCBI-ProteinID:
UJF24597
LinkDB
All DBs
Position
complement(35879..37249)
Genome browser
AA seq
456 aa
AA seq
DB search
MNSQNLSLKLKQQLALTPQLQQAIGILNMNHVELKQNITTMLEQNFMLEVEDEFDEIVNE
PDVGDDEEPPLDSALDEQWQDDDWSQYTTPAEAFDSGQITPYSPSLEEHLSEQLSIMMLD
ERVQLAAIILIYVLDEDGYCRADLTMMAKSHQIKEVIFKEALSAIQQCTPSGIGARNLEE
CMHLQIDALAKNTPHLETLKLIMRRYFAYIGQDPSMVKKRLSLSDQAFDGALALLRSLNP
SPAETYAPPPTTYVEPEIFVQEKGGISYIAEHKQYYRTPNINQTYASLVSESAQEKTLIQ
SQLNEAKWFLNAIEKRQDTIRRVAGVIVGMQQDFFQQGDIAMRPLTRAQVADMLELHEST
VSRAVNGKFLHCKRGIFELRHFFSATLSTDQGADSSATAVKARIREIIEGENESKPLSDQ
SIADQLAQEGQPLARRTVAKYREAMHILSAAKRRKR
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
gtgaatagccaaaatctttccctcaaactcaaacagcaactggccttaacgccacagttg
cagcaagctattggtattctcaacatgaaccatgttgagctcaaacaaaacatcaccacc
atgcttgaacaaaattttatgcttgaggtggaagatgagtttgacgaaatcgtgaacgag
cctgatgttggtgatgacgaggaaccgccacttgatagtgcgcttgatgaacaatggcaa
gatgatgactggtcacaatacacaacccctgccgaagcctttgatagcggtcaaattacc
ccttatagcccatcgctcgaagaacatctaagcgaacaattaagcattatgatgctcgat
gagcgcgtgcaacttgcagcaatcattctcatttatgtgctcgatgaagacggctattgt
cgcgccgatcttacgatgatggctaaatcacaccagatcaaagaagtcatcttcaaggaa
gcattgtcagccatacagcaatgcaccccttcaggcattggcgcacgcaatcttgaagaa
tgtatgcacttacaaattgatgcgctcgcgaaaaacaccccccatctagaaacgctcaag
ctgatcatgcggcgttattttgcctatattggccaagacccaagcatggttaaaaagcgc
ttatcgctgagcgatcaagcctttgatggtgcacttgcgctgttacgcagcctcaaccca
tcaccggctgaaacctacgcaccaccaccgaccacctatgttgagccagaaattttcgtg
caggaaaaaggtggcatcagttatattgccgagcacaagcagtactaccgcaccccgaac
atcaatcaaacttatgccagccttgtcagcgaaagcgctcaagaaaaaaccctgattcaa
tcgcaattaaacgaagctaaatggtttcttaatgcgattgaaaagcgccaggataccatc
cgccgagtcgccggcgtcattgtgggtatgcagcaagatttcttccaacaaggggatatc
gcgatgcgaccgctgacgcgtgcgcaggttgctgacatgcttgaactgcacgaatcaacc
gtctcacgtgcagttaatggcaagtttttacactgtaagcgtggcatttttgaattacgt
cactttttctcggcaacgttatcaaccgatcaaggcgctgatagctccgcgaccgctgtt
aaagcgagaatccgcgaaattattgaaggggaaaatgaaagcaagccattgagcgatcaa
agcattgccgatcagctggctcaagaaggccaaccccttgcccgtcgcaccgtcgccaaa
tatcgagaggcgatgcatattctcagtgctgcaaaaagacgcaaacgctaa
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