Suttonella sp. R2A3: L0B52_01440
Help
Entry
L0B52_01440 CDS
T07824
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sutr
Suttonella sp. R2A3
Pathway
sutr03030
DNA replication
sutr03430
Mismatch repair
sutr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sutr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
L0B52_01440 (dnaE)
03430 Mismatch repair
L0B52_01440 (dnaE)
03440 Homologous recombination
L0B52_01440 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sutr03032
]
L0B52_01440 (dnaE)
03400 DNA repair and recombination proteins [BR:
sutr03400
]
L0B52_01440 (dnaE)
Enzymes [BR:
sutr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
L0B52_01440 (dnaE)
DNA replication proteins [BR:
sutr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
L0B52_01440 (dnaE)
DNA repair and recombination proteins [BR:
sutr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
L0B52_01440 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Cupin_6
Motif
Other DBs
NCBI-ProteinID:
UJF24828
LinkDB
All DBs
Position
285619..288999
Genome browser
AA seq
1126 aa
AA seq
DB search
MPDFSHLHVHSEYSLNDSMLRIGQIVSLASKQGMNSVALTDRNNLYAAIKFYTKARAAGI
KPIIGCDLSVRDDSGAVHQLVLLAQNRQGFVQLCELISFAYQHDQAQGIVAVDEARLTLA
QCSDLIALSGGVQGDIAAAIERGDLPAARARCVHWQRIFADRFYLQIARHGKDSEARYEQ
ACRALGTELGVAAVASNLACFSKPEEYEVHEARVCISTGRLMDDPRRERFFTDQHYFKST
QTMHGAFADAPELLTNANSVAQRCNLELDLGKNVLPDFPLPDGQEIDTYLREQSHLGLDN
RLVQLFPEESERQAATAQYKARLDTELDVVCSMGFPGYFLIVADFIQWAKDHDIPVGPGR
GSGAGSLVAYALSITDLDPLAYDLLFERFLNPERVSMPDFDVDFCMDKRDAVIDYVAEKY
GREKVSQIATHGTMAAKAVVRDVGRVLGLPYPFVDNISKLIPNVLGITLPDVLGLKPINP
NEDAESKEKRLKMLSPDLIEQRAQNEDTDTLLTMALQLEGIARNVGKHAGGVVIAPTKIT
DFSALYAEQAGGNISSQFDKDDIEAAGLVKFDFLGLRTLTVIDWAVAFVNKKREQLGEQP
LVMNNLPLDDPETYRLLNTCRTTAVFQLESRGMKDLIGKLRPDNFEEIIALVALYRPGPL
KSGMVDDFVNRKHGLAEVDYPHPALEPILDTTYGVMVYQEQVMQVAQTLANYSLGEADIL
RRAMGKKKAEVMAEQREIFVSRAVESGVEELTATNIFDMMAKFAEYGFNKSHSAAYALLS
YHTGWLKAHYPAQFMAAVLTSDIDHTDKIVQMIDECQAMGLRVLPPCINRSSYAFTVSED
DAVIYGLGAVKGVGEGAINLLINERQKNGPFSSLLDLCRRLDLKKLNKRTLETLICAGAF
DFIEPNRGGLLAALPQAIRLAEQHHRDQKHQQNDMFGLFAAPGATNSQDTLSIRIEDAWE
PREQLEYEKQTLGLFLSDHPVNSERDTLQKLCSHNLAELDEAMENWIKPTRRDEGIPIRI
GGLVCEARHLVSKKGHPMAFITLDDRSGRREVGVFGDVLSQHKDQLSDDEILIIDAKAEF
VSYRDEWRIAAQKIWRIEDAKIALIRHIRIDCDEEFGAWGLLPSFS
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgcctgatttttctcatctgcacgttcatagcgaatattccttaaacgacagtatgtta
cgtatcgggcagattgtctctttagccagcaaacaagggatgaactctgtcgcgcttacc
gatcgtaacaacctttatgcggcgatcaagttttataccaaagcacgagcggctgggatt
aaaccgattattggttgcgatttatcggtgcgtgatgacagtggtgcggttcatcaactg
gtgttgcttgcacaaaatcgccaaggctttgtgcaactgtgtgagttaatcagcttcgct
taccagcatgaccaagcacaaggtattgtcgcggtggatgaagcgcgtctaacactcgcc
caatgcagtgatctaatcgccttaagtggcggtgtgcaaggtgatattgccgcagcgatt
gaacgcggtgatttgccggctgctagagcgcgttgtgtccattggcaacgcatttttgct
gatcgcttttatttacaaattgcccgtcatggtaaagacagtgaagcgcgttatgagcag
gcttgtcgtgctctgggtactgagttaggtgttgctgctgtagcgagtaacttagcgtgc
ttcagcaaaccagaagaatatgaagtccacgaggctcgggtgtgtatcagtacgggtcgg
ttaatggatgatccgcgtcgtgagcgcttctttaccgaccaacattatttcaaaagtacc
cagacgatgcacggagcattcgctgatgcgcctgagttgctgacaaacgcaaatagtgtt
gctcagcgttgtaacttagaattggatctcggtaaaaatgtgttacccgattttccactc
cccgatgggcaggaaatcgacacgtatttacgcgaacaatcacatcttggtttggataat
cgcttggtccagctgtttcctgaagagagtgagcgacaagccgctacagcgcaatataaa
gcacgacttgatactgagcttgatgtcgtgtgctcgatgggctttcctggctactttcta
atcgttgctgattttatccaatgggcaaaagaccatgatattccggtgggcccaggacga
ggttctggtgccggttcgttagtggcttatgctttaagtattaccgatcttgatccgctg
gcttatgatttactgtttgagcgatttttaaatccagaacgggtatcgatgcccgatttt
gacgtcgatttttgcatggacaagcgcgatgcggtgattgactatgtggctgagaaatac
gggcgtgaaaaagtctcccaaatcgcgactcacgggacaatggcggctaaagctgtggta
cgtgatgttgggcgcgtgctgggtctgccgtatccttttgttgataatatctctaagctc
attcctaatgtgttagggattaccttacccgatgtgttgggtttgaaaccgatcaatccc
aacgaagatgcagaaagtaaagaaaaacggttgaaaatgctttctcctgatcttattgag
cagcgcgcgcaaaacgaagataccgataccttactcacgatggcgttgcagctcgaaggg
attgcgcgaaatgtcggtaagcatgccggtggagtggttattgcaccaaccaaaattacc
gatttttccgcgctgtacgctgaacaagctggcggtaatatttcctcacaattcgataaa
gacgatattgaagccgctgggttggtgaagtttgactttttaggcctacgcacactcacg
gttatcgattgggcggtggcgtttgttaataagaagcgcgagcagcttggtgaacagccg
ttagtgatgaataacctgccgcttgatgacccagagacttatcgtttactcaatacctgt
cgcacgacagctgttttccagctcgaatcgcgcgggatgaaagatctgattggcaagctt
agacctgataattttgaagaaattatcgctctggtggcgctctatcgaccaggacctttg
aaatccggcatggtcgatgattttgttaaccgtaagcacgggctggctgaagtggattat
ccgcatcctgcactcgagcctattttggatacgacctatggagtaatggtctatcaagaa
caagtcatgcaggtggcgcaaacgctcgcgaactatagtttaggtgaagccgatattctg
cgccgcgcgatgggtaaaaagaaagctgaggttatggccgagcagcgggagattttcgtt
tcccgcgcggttgaaagcggcgttgaagagctcaccgcgaccaacatctttgacatgatg
gccaaatttgctgaatatggctttaacaagtcgcattcggctgcttatgccttattgtcg
taccatactggctggctgaaagcacattaccctgcacaattcatggccgccgtgctgacc
tctgatattgatcacaccgataaaatcgtgcagatgatcgatgagtgtcaggcgatgggc
ttgcgagttttaccaccgtgtattaaccgctctagctacgcgtttaccgttagcgaagac
gatgcggtgatctatggtttgggcgcggttaaaggcgttggtgaaggggcgatcaattta
ctcattaatgagcgtcaaaaaaatggcccatttagctctttactggatttatgtcgccgg
ctcgatttaaagaaactcaataaacgtacgctggaaacgctgatttgtgcgggtgcgttt
gactttattgagcctaatcgaggggggttattagccgctttgccacaggctatacgactc
gccgaacaacaccatcgcgatcaaaaacaccagcaaaatgatatgtttggattattcgct
gctccgggtgctacaaattctcaggataccttatcgattcgaattgaggatgcctgggaa
ccacgcgagcaacttgaatatgaaaaacagaccctcggcttgtttctcagcgatcatccg
gtcaatagcgaacgtgataccttacaaaagctatgcagtcataacctcgccgagcttgat
gaagcgatggaaaattggattaaaccaacacgtcgtgatgaaggcattccaattcgtatt
ggcgggttggtttgtgaagcacgccatctcgtgagcaagaaagggcatccgatggccttt
atcactctagatgaccgctctggtcgccgtgaagtgggtgtgtttggcgatgttcttagc
cagcataaagatcagttaagtgacgatgaaattttgattatcgacgctaaggcagaattt
gtctcttatcgtgatgaatggcgaattgctgcacaaaaaatctggcgtatagaagacgct
aaaattgcgctgatccgtcatattcgtattgattgcgatgaagagtttggcgcgtggggg
cttttacccagtttctcttag
DBGET
integrated database retrieval system
